Gene Sala_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2169 
Symbol 
ID4080203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2278882 
End bp2279442 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID638010547 
Producthypothetical protein 
Protein accessionYP_617211 
Protein GI103487650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.99348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.801991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACG ATCCAAAGTC ACCGACAGAC GCGGGTTTTC CGCCCAACGC CGTGCATCTG 
GTGCGCACGA CGCAGCAGAT CACGATGCAA TTGTCGCAGA TGGCCGACCA GAAAGCGTCG
ATCCTGATGG GCGCGACCTT TGTGGTGTTT ACGCTCGCGG TGGGACAGGC GCGCACGGGC
AGCGGTGCGC TCGCGATGCC GCTCACCATC CTCGCGACCT TTTCCTTCCT TTCGGCGCTG
CTCGCGGTGT CGGCGGTGCT GCCGCGCGTG GGACAGGCGC CGCCCGTCGT CTACAAGGAC
GGCAAGGATC ACAGCAACAT CCTCTTTTTC GGCCGTTTCT CGCAGATGGA TGAAGATGAC
TATATCGCCG CGGTCAAGGC GCGCCTGCGC AGCGAAGAAG ACATCTACGA AACGATGCTG
CGCGACACCT ATCAGAATGG CATGGTGCTG GCGCGGCGCA AATATCGCTA TCTCGCCTAT
GCCTATCGCC TGTTCGTTGT CGGCCTGACG CTGACCTTTG GGGCGTTCGG GGTGGAGATG
GCGCGGATGT GGACGGAGTG A
 
Protein sequence
MPDDPKSPTD AGFPPNAVHL VRTTQQITMQ LSQMADQKAS ILMGATFVVF TLAVGQARTG 
SGALAMPLTI LATFSFLSAL LAVSAVLPRV GQAPPVVYKD GKDHSNILFF GRFSQMDEDD
YIAAVKARLR SEEDIYETML RDTYQNGMVL ARRKYRYLAY AYRLFVVGLT LTFGAFGVEM
ARMWTE