Gene Sala_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2159 
Symbol 
ID4080193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2270145 
End bp2270651 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID638010537 
Producthypothetical protein 
Protein accessionYP_617201 
Protein GI103487640 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.475025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCG TTGAAACCCA CGCCGCGGCG CCGTGGCCCG ACGCGCTCGA CTGGGCAGCG 
CGCGCGGCCG AGGCGGTGGC AGCGGCGTTT GCCATCACCC CCTTCGCGGC GCTCGCCGAC
GCGGCGCCGC TGGTCGAGGT TGCGGTGCGC CTGACCGACG ATGCCGAGGT GCATACGCTC
AACCGCGATT TCCGCGGGCG TGACAAGCCG ACCAATGTGC TCTCCTTTCC GCAGGTACAG
AACGACCTGC TCGAAAGTCT CGCGAACAGC GACGATGGCG AAATCCTGCT GGGGGACATC
GTTCTCGCGC GCGAAACCTG CGCGCGCGAA GCGGATGAGA AGGGCGTTTC GCTCGCCGCC
CACGCGACGC ACCTCATCGT TCACGGCGCG CTGCACCTCG TCGGCTACGA CCATATGGAC
GATGTTTCGG CGGCGGCGAT GGAAGCGCTC GAAGTGAAAG CCCTTGCATC GCTGGGCATC
GCCAATCCAT ATGCCGATCA GGATTAA
 
Protein sequence
MLSVETHAAA PWPDALDWAA RAAEAVAAAF AITPFAALAD AAPLVEVAVR LTDDAEVHTL 
NRDFRGRDKP TNVLSFPQVQ NDLLESLANS DDGEILLGDI VLARETCARE ADEKGVSLAA
HATHLIVHGA LHLVGYDHMD DVSAAAMEAL EVKALASLGI ANPYADQD