Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2142 |
Symbol | |
ID | 4080139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2249385 |
End bp | 2250056 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638010520 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_617184 |
Protein GI | 103487623 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.142397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGCAAC TCTATCAATT TCCGCTCTGC CCCTTTTCGC GCAAGGTCCG CCTGCTGCTC GGCGAAAAGG GTGTCGGTTA CGAATTGGTG CGCGAATCGC CGTGGGAGCG GCGCGACGAG TTCATCGACC TCAATCCCGC GGGTCGCACC CCGGTGATGG TCGATCAGGT GCGCGGGCAG GTGCTGATCG ACAGCATGGC GATCGCCGAA TATTTCGAGG AGACGGTCGA GGGCAAGGCG ATGATCAACG GCACCGCCGC CAACCGCGCT GAAATCCGCC GCCTGACCGC CTGGTTCGAT CAGGATTTCT ATTATGAAGT CACCGGGCCT TTGCTGTTCG AGCGGATGCA GAAGCGCATC GTTCACCGCC AACCGCCCGA CAGCGGCGCG CTGCGCGAGG CGATGAAGGC GGCGAATAAT CATCTCGACT ATATCGACTA TCTGATCGAT CACCGCACAT GGCTCGCCGG CGCGACGATG AGCCTCGCCG ATCTGGCGGC CGCCGCGCAT ATATCGGTTG CCGACTATCT GGGCGGAATC GACTGGACCG GGCACGAGCA GACAAAGGGC TGGTATTCGG GGCTGAAATC GCGGCCTTCG TTCCGCCCGC TGCTGGCCGA GCGGATGGAA ATCATCACGC CGCCCAAATA CTACGAGGAC GTCGACTTCT GA
|
Protein sequence | MWQLYQFPLC PFSRKVRLLL GEKGVGYELV RESPWERRDE FIDLNPAGRT PVMVDQVRGQ VLIDSMAIAE YFEETVEGKA MINGTAANRA EIRRLTAWFD QDFYYEVTGP LLFERMQKRI VHRQPPDSGA LREAMKAANN HLDYIDYLID HRTWLAGATM SLADLAAAAH ISVADYLGGI DWTGHEQTKG WYSGLKSRPS FRPLLAERME IITPPKYYED VDF
|
| |