Gene Sala_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2142 
Symbol 
ID4080139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2249385 
End bp2250056 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID638010520 
Productglutathione S-transferase-like protein 
Protein accessionYP_617184 
Protein GI103487623 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.142397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAC TCTATCAATT TCCGCTCTGC CCCTTTTCGC GCAAGGTCCG CCTGCTGCTC 
GGCGAAAAGG GTGTCGGTTA CGAATTGGTG CGCGAATCGC CGTGGGAGCG GCGCGACGAG
TTCATCGACC TCAATCCCGC GGGTCGCACC CCGGTGATGG TCGATCAGGT GCGCGGGCAG
GTGCTGATCG ACAGCATGGC GATCGCCGAA TATTTCGAGG AGACGGTCGA GGGCAAGGCG
ATGATCAACG GCACCGCCGC CAACCGCGCT GAAATCCGCC GCCTGACCGC CTGGTTCGAT
CAGGATTTCT ATTATGAAGT CACCGGGCCT TTGCTGTTCG AGCGGATGCA GAAGCGCATC
GTTCACCGCC AACCGCCCGA CAGCGGCGCG CTGCGCGAGG CGATGAAGGC GGCGAATAAT
CATCTCGACT ATATCGACTA TCTGATCGAT CACCGCACAT GGCTCGCCGG CGCGACGATG
AGCCTCGCCG ATCTGGCGGC CGCCGCGCAT ATATCGGTTG CCGACTATCT GGGCGGAATC
GACTGGACCG GGCACGAGCA GACAAAGGGC TGGTATTCGG GGCTGAAATC GCGGCCTTCG
TTCCGCCCGC TGCTGGCCGA GCGGATGGAA ATCATCACGC CGCCCAAATA CTACGAGGAC
GTCGACTTCT GA
 
Protein sequence
MWQLYQFPLC PFSRKVRLLL GEKGVGYELV RESPWERRDE FIDLNPAGRT PVMVDQVRGQ 
VLIDSMAIAE YFEETVEGKA MINGTAANRA EIRRLTAWFD QDFYYEVTGP LLFERMQKRI
VHRQPPDSGA LREAMKAANN HLDYIDYLID HRTWLAGATM SLADLAAAAH ISVADYLGGI
DWTGHEQTKG WYSGLKSRPS FRPLLAERME IITPPKYYED VDF