Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2136 |
Symbol | |
ID | 4080133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2239561 |
End bp | 2240499 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638010514 |
Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
Protein accession | YP_617178 |
Protein GI | 103487617 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACTT TCGACGGGCA ATTGATCACG GTGCTGGGCG GCGGCGGCTT CCTCGGCCGC TATGTCGTGC AACGGTTGCT GGCGCGCGGC GCGCGCGTTC GTATTGCACA GCGCGACCCG CGCGCGGCGA CCTTCCTGAA GCCGCTCGGC GGGCTTGGCC AGACGCAGTT CGTCCACGCC GACGTCCGTG ACGCGGCGAG CGTGGCGCGC GCGGTGCAGG GCAGCGACGC GGTGATCAAC CTGGTCGGCG CGTTCGACGA TATGCGCGCG GTGCAGGCCG ATGGCGCGGG ACATGTCGCG ACGACGGCGA AAGCGGCGGG CGCGCGCGCG CTCGTCCATG TCTCGGCGAT CGGCGCCGAC CGCGACAGCC CTTCGGCCTA TGGCCGCAGC AAGGGCGACG GCGAAGCCGC GGTGCGCGCG GCCTTTACCG GGGCCGCCAT CCTGCGTCCC TCGATCATCT TTGGCCGCGA GGACCGGTTC ATCAATCGCT TTGCCGGCAT GATGCGCCTC GCGCCGGTCA TGCCGGTGAT CGCGCCGCAA GCGAAGTTCC AGCCCGTCTA TGTCGGCGAT GTCGCCGATG CGGTCGTCGC CGCGCTGGCC GACACGGCCA CCGGCAGGCT GTTCGAACTC GGTGGGCCGC AGGTGCTGAC GATGCGCGAA CTGCTCCGCT GGATCGCCGA TGCAACCGGA CGGTCGCCGC TGTTCATCGA CGTGCCCGAT TTTCTTGCCT CGGCGCTCGC GACCGGATTC GGCTGGGCGC CCGGTGCGCC GATCACCAGA GACCAGTGGC TGATGCTGCA AAGCGACAAT GTCGTGGCGA GCGGCGCCGC GGGCCTCGCC GAGCTTGGCA TCACGCCCAC CCCGCTCGCG GCGGTCGCCG ACGGCTGGCT GGTGCAATAT CGCCGCCACG GCCGGTTCAC GGTCGAAACC CCCGCCTGA
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Protein sequence | MQTFDGQLIT VLGGGGFLGR YVVQRLLARG ARVRIAQRDP RAATFLKPLG GLGQTQFVHA DVRDAASVAR AVQGSDAVIN LVGAFDDMRA VQADGAGHVA TTAKAAGARA LVHVSAIGAD RDSPSAYGRS KGDGEAAVRA AFTGAAILRP SIIFGREDRF INRFAGMMRL APVMPVIAPQ AKFQPVYVGD VADAVVAALA DTATGRLFEL GGPQVLTMRE LLRWIADATG RSPLFIDVPD FLASALATGF GWAPGAPITR DQWLMLQSDN VVASGAAGLA ELGITPTPLA AVADGWLVQY RRHGRFTVET PA
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