Gene Sala_2131 details

Gene Information

• Locus tag: Sala_2131
• Symbol: leuD
• ID: 4080106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: +
• Start bp: 2236208
• End bp: 2236801
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638010507
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_617173
• Protein GI: 103487612
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCCGC TGAACCAGGT CGAGGGCCGC GCCATCCCGC TGGGCCTCAA AAATATCGAC 
ACCGACGTCA TCATCCCTGC GCACTGGCTG AAGACCACGA CGCGCGAGGG CATGGGACGC 
GGCGCGTTCG AAAGCCTGCG CGCCGATCCC GACAATCTGT TCGACCGCCC CGAATACAGG 
CAAGCCCCGA TCCTGATCGC GGGCGACAAT TTCGGATGCG GGTCGAGCCG CGAACATGCC 
GCCTGGGCGC TCGGCGACCT CGGTATCCGC GTCGTGATCG CGCCGAGCTA TTCGGACATT 
TTTTCGGGCA ATGCGGTGAA GAACGGCATC CTGCCGGTCG TGCTGCCGCA GGCGGCGATC 
GACCGGCTTC TCGAAGTGGC GGCGACCGAT CCGGTCCGCA TCGACCTCGA GCATCAGACG 
GTGACGACGC CGTTCCAGGA CCGCTTCACC TTCGAGATCG ACCCGTTCCG CAAGATGTGC 
CTGCTCGAAG GGCTCGACGA GATTTCGCTG ACCGAAAAGA GCGATGCGGC GATCGGCGCC 
TATGAAGACA GGCTCGATGC CGAGCGTCCG TGGATGCGCG CCGTCGTCGG GTAG 

 

Protein sequence

MTPLNQVEGR AIPLGLKNID TDVIIPAHWL KTTTREGMGR GAFESLRADP DNLFDRPEYR 
QAPILIAGDN FGCGSSREHA AWALGDLGIR VVIAPSYSDI FSGNAVKNGI LPVVLPQAAI 
DRLLEVAATD PVRIDLEHQT VTTPFQDRFT FEIDPFRKMC LLEGLDEISL TEKSDAAIGA 
YEDRLDAERP WMRAVVG