| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2129 |
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| Symbol | |
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| ID | 4080104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2233902 |
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| End bp | 2235332 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010505 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_617171 |
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| Protein GI | 103487610 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGC CCCGCACGCT TTACGAAAAA ATCTGGGACG CGCATGTCGT CGAACGGCGC
GGCGACGGCA CCTGCCTGAT CTTCATCGAC CGCCACCTCG TCCATGAAGT CACCAGCCCG
CAGGCCTTTG CCGGGCTTCG CGCGAGCGGC CGCACGGTGC GCCGCCCCGA CCTGACGCTC
GCGGTGCCCG ACCATAATGT GCCGACGACG CCGCGCAAGG ATGCGGCGGG CAACCGGCTG
CCGATCGCCG ACCCCGAAAG CGCGGCGCAA TTGGCGGCGC TGGAGAAGAA CGCGCCCGAG
TTCGGCATCC GTTACATCGA CGCGATCGCG CCCGAGCAGG GCATCGTTCA TGTCGTCGGC
CCCGAACAGG GTTTTTCGCT GCCCGGCGCA ACGATCGTTT GCGGCGACAG CCACACGGCG
TGCCACGGCG GCATCGGCGC GCTCGCCTTT GGCATCGGGA CGAGCGAGGT CGAGCATGTT
CTGGCGACGC AGACCCTGCT GCTCCAGCCC GCGAAGACGA TGGAGGTGCG CGTCGAGGGC
GACGTCGGCC CCGGCGTCAG CGCGAAGGAC ATCATCCTGC ACATCACGGG CACCATCGGC
GCCGCGGGCG GCACGGGCCA CGTCATCGAA TATACCGGCA GCGCGATCCG CGCGCTGTCG
ATCGAGGGGC GGCTGACGAT CAGCAACATG GCGATCGAGG GCGGCGCGCG CGCCGGACTG
ATCGCGCCCG ACGAGACGAC TTTCGCTTAT CTCAAGGGCC GCCCCTACGC CCCGAAGGGC
GCCGACTGGG ACGCCGCGGT CGCTTACTGG AAAAGCCTGA CCACCGATCC CGGCGCGACT
TACGACAAGG TGGTCGTCAT CGACGCCGCC GACATCGCGC CCAGCGTGAC GTGGGGCACG
AGTCCCGAGG ACGTCGTGCC GATCACCGGC ACCGTGCCCG ATCCGGCAAG CTTTTCCGAT
CCGTCGAAAC GGGCCGCCGC CGCCAAGAGC CTGGCCTATA TGGGGCTCGA ACCCGGCACG
CGGATGCAGG ATGTGCCGGT CGAAAATATC TTCATCGGCA GCTGCACCAA CAGCCGGATC
GAGGATTTGC GCGCCGCCGC AGCGGTGCTG AAGGGTCGCA GGAAGGCGCC GGGCGTCAAA
TGGGCGATCG TCGTTCCCGG TTCGGGCCTG GTGAAGGCTC AGGCCGAGGC CGAGGGACTC
GACCGCATCT TCATCGACGC GGGACTCGAA TGGCGCGAGC CCGGCTGTTC GGCGTGCCTC
GCGATGAACC CCGACAAGGT GCCCGCGGGC GAGCGCTGCG CATCGACGAG CAATCGCAAT
TTCGTCGGTC GGCAAGGACC GGGTGCCCGC ACGCACCTCG TCAGCCCCGC GATGGCCGCG
GCGGCGGCGG TGACCGGAAA GCTCACCGAC GTGCGCGAAT TAATGGCATG A
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| Protein sequence | MTRPRTLYEK IWDAHVVERR GDGTCLIFID RHLVHEVTSP QAFAGLRASG RTVRRPDLTL
AVPDHNVPTT PRKDAAGNRL PIADPESAAQ LAALEKNAPE FGIRYIDAIA PEQGIVHVVG
PEQGFSLPGA TIVCGDSHTA CHGGIGALAF GIGTSEVEHV LATQTLLLQP AKTMEVRVEG
DVGPGVSAKD IILHITGTIG AAGGTGHVIE YTGSAIRALS IEGRLTISNM AIEGGARAGL
IAPDETTFAY LKGRPYAPKG ADWDAAVAYW KSLTTDPGAT YDKVVVIDAA DIAPSVTWGT
SPEDVVPITG TVPDPASFSD PSKRAAAAKS LAYMGLEPGT RMQDVPVENI FIGSCTNSRI
EDLRAAAAVL KGRRKAPGVK WAIVVPGSGL VKAQAEAEGL DRIFIDAGLE WREPGCSACL
AMNPDKVPAG ERCASTSNRN FVGRQGPGAR THLVSPAMAA AAAVTGKLTD VRELMA
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