| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2123 |
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| Symbol | |
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| ID | 4080098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2229553 |
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| End bp | 2230263 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010499 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_617165 |
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| Protein GI | 103487604 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.678104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA AGCTTTATCC CGACGCCGCT GCCGCGCTCG ACGGTCTGCT CTTTGACGGG
ATGCAGATTT GCGCGGGCGG CTTTGGCCTG TGCGGCATCC CCGAACGGTT GATCGACGCG
GTCCGCGACG CGGGGGTCAA GGATCTGACC ATCGCGAGCA ACAACGCCGG GATCGACGGC
GAAGGACTCG GCAAGCTGCT ACGCACGCGG CAGGTCAAGA AGATGATCTC GTCCTACGTC
GGCGAGAACA AGGAGTTCGA GCGGCAATAT CTGGCGGGCG AGCTGGAGGT CGAGTTCTGT
CCGCAGGGGA CGCTCGCCGA ACGCTGCCGC GCGGGCGGCG CGGGCATTCC GGGCTTCTAT
ACCAGAACCG GCGTCGGCAC GCTCGTCGCC GAGGGCAAGG AAGTGAAGAG TTTCGACGGG
CAGGATTATA TCCTGGAGCG CGGCATCTTC GCAGACCTCG CGATCATCAA AGGGTGGAAA
GCCGACGAAA GCGGCAACCT GATTTTCCGC AAGACCGCGC GCAATTTCAA CCAGCCGATG
GCGACCGCGG CCAGGATCTG CGTCGCCGAG GTCGAGGAAA TCGTGCCTAC GGGCAGCCTC
GACCCCGACT GCATCCACCT GCCCGGCATC TATGTGAAGC GGATGATCGT CGGCGCGCCG
TACGACAAGA AGATCGAGTT CCGCACCGTT CGCCCGAGGG AGACCGCCTG A
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| Protein sequence | MANKLYPDAA AALDGLLFDG MQICAGGFGL CGIPERLIDA VRDAGVKDLT IASNNAGIDG
EGLGKLLRTR QVKKMISSYV GENKEFERQY LAGELEVEFC PQGTLAERCR AGGAGIPGFY
TRTGVGTLVA EGKEVKSFDG QDYILERGIF ADLAIIKGWK ADESGNLIFR KTARNFNQPM
ATAARICVAE VEEIVPTGSL DPDCIHLPGI YVKRMIVGAP YDKKIEFRTV RPRETA
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