| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2122 |
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| Symbol | |
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| ID | 4080097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2228568 |
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| End bp | 2229461 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010498 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_617164 |
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| Protein GI | 103487603 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.303428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATCA ATCGCGTCGC GCTCTACCAT CTCGAAACCC TGCTCTGGAT CGACCGGCTC
GGCACCTTTT CGGCCGCCGC CGAACGGCTC AACACGACGC AGCCCGCGGT GTCGGCGCGG
ATGCGCGAGC TTGAACAAAG GCTCGGCACA CCGCTGTTCC ACCGCGACGG CCGGACGATG
GCGCTGACCG CTGCGGGGCG CAAGCTGGTG CGCGACTGCG ACCCGTTGCT GCGCGACATG
CAGCTCGCGC TGCTCGGCAG CGGCGGCTTT GCCGAGGCGA GCGGCGTCGT GCGCATCGGC
GCGGGGGAGA TTGCGGCGGC GAGCTGTCTG CCCGCCTTTG TCGCGCGGTT GAAGGCCGAC
ATGCCCAATG TCGCGCTGGA GATCGAGATC GACCTGACCG CCAACCTCAT CCAGCAACTG
CTCACCGGGC GCACCGACAT TGCCTTTGCC GCGGGGCCGA TCGCGCACCC GGCGCTCAAG
ACCAGCCCGA TCGGTGAGGT CGAGCTGGTG TGGCTCGCGA ATCCGGCGGT CGCCGCCGCC
TTTGCAGGGG GCGAGGCGAT GCCGCCGGTC TGGTCGCTCG CCAGCCATTC GCCGATTCAC
GGCCGGATGC GCGAGGCGAT CGCCGCGTCG CGCATAGCGC AAAAATCGCT CAACCTCTGC
AACAACGCCC GCATGATGAT CGACATCGCG CGCGCGGGCG GCGGCATCGG CATCTTTCCC
CGCCCGATGG TGCGCGGCGA GATCGCGGCG GGCGCGCTCG TCGAAATTGC CGCGATGCCC
GCGCTCGCCC CGGTCGCCTT CCACGTCGCG ATGCGCGTCG CCGACACCGA GCCCGTGCTG
ACGCAAATCT TCGAGCGCGC GGCGAAGCTC GACCTCGCTG AGGTGGCGGT TTGA
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| Protein sequence | MSINRVALYH LETLLWIDRL GTFSAAAERL NTTQPAVSAR MRELEQRLGT PLFHRDGRTM
ALTAAGRKLV RDCDPLLRDM QLALLGSGGF AEASGVVRIG AGEIAAASCL PAFVARLKAD
MPNVALEIEI DLTANLIQQL LTGRTDIAFA AGPIAHPALK TSPIGEVELV WLANPAVAAA
FAGGEAMPPV WSLASHSPIH GRMREAIAAS RIAQKSLNLC NNARMMIDIA RAGGGIGIFP
RPMVRGEIAA GALVEIAAMP ALAPVAFHVA MRVADTEPVL TQIFERAAKL DLAEVAV
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