Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2118 |
Symbol | |
ID | 4080093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2225011 |
End bp | 2225931 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010494 |
Product | putative gluconolactonase precursor |
Protein accession | YP_617160 |
Protein GI | 103487599 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0176891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGT TTGAACTGAT CGCCGACGGA CTGCGCTTTC CCGAGGCGCC GGTGGTGATG GACGACGGCA GCGTCATCGT CACCGAAGTC GCCGCGGGGC GGATCACGCG CTGCTGGCCC GGTGGCAGAA AACAGGTGAT CGCGACACCC GGCGGCGGCC CCAACGGCCT GGCGATCGGT CCCGACGGCA AGCTCTATTG CTGCAACAAT GGCGGGTTCA ACTATGTCGA ATCGAACGGC TATCTGGCGC CGCACGGCAT CGCCGACGAT TATTCTGGCG GGCGGATCGA GCGGATCGAC ATCGCGACGG GCGCGGTCGA GGTGCTTTAC CAGTCGGGCG ATCACGGCGT GGTGCTGCGC GGCCCCAACG ACCTGATGTT CGACAGCCAC GGCGGCTTCT GGTTCACCGA CCATGGCAAG GTCGATTATG CCAAGCGCTG TCACGACATC GTCGGCATCT TTTATGCCAA GGCCGACGGC AGTTTTATCG AGGAAGTGAT CTTTCCGAGC TATAACCCCA ACGGCATCGG CCTCTCGCCC GACGGGAGCA AGCTCTACGC CGCGGAAACC TATACCTGCC GGCTGACCCG GTTCAACATC GTCGCGCCCG GCAAGGTCGA CGATGCCGCA GGACCGGGCG GCCCCGGCAT TCCGCTCTAT CGCCCCGCGG GCTATAAGTT CTTCGACAGC CTTGCGATGG AAGCGAACGG CAATATCGCC GTCGCGACGA TCGGCGAATG CGGGATCAGC GTCGTTTCGC CCACGGGCGA GCTGGTCGAG TTCGTCGCCA CCGACGATAT TTTCACGACC AACATCGCCT TTGGCGGGCC CGACCGGCAG GATGCCTATA TCACCCTGTC GGGAACCGGA AGACTGGTGA AGACACGCTG GACGCGGCCG GGATTGCCGT TGCCATATTG A
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Protein sequence | MAEFELIADG LRFPEAPVVM DDGSVIVTEV AAGRITRCWP GGRKQVIATP GGGPNGLAIG PDGKLYCCNN GGFNYVESNG YLAPHGIADD YSGGRIERID IATGAVEVLY QSGDHGVVLR GPNDLMFDSH GGFWFTDHGK VDYAKRCHDI VGIFYAKADG SFIEEVIFPS YNPNGIGLSP DGSKLYAAET YTCRLTRFNI VAPGKVDDAA GPGGPGIPLY RPAGYKFFDS LAMEANGNIA VATIGECGIS VVSPTGELVE FVATDDIFTT NIAFGGPDRQ DAYITLSGTG RLVKTRWTRP GLPLPY
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