Gene Sala_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2118 
Symbol 
ID4080093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2225011 
End bp2225931 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID638010494 
Productputative gluconolactonase precursor 
Protein accessionYP_617160 
Protein GI103487599 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0176891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGT TTGAACTGAT CGCCGACGGA CTGCGCTTTC CCGAGGCGCC GGTGGTGATG 
GACGACGGCA GCGTCATCGT CACCGAAGTC GCCGCGGGGC GGATCACGCG CTGCTGGCCC
GGTGGCAGAA AACAGGTGAT CGCGACACCC GGCGGCGGCC CCAACGGCCT GGCGATCGGT
CCCGACGGCA AGCTCTATTG CTGCAACAAT GGCGGGTTCA ACTATGTCGA ATCGAACGGC
TATCTGGCGC CGCACGGCAT CGCCGACGAT TATTCTGGCG GGCGGATCGA GCGGATCGAC
ATCGCGACGG GCGCGGTCGA GGTGCTTTAC CAGTCGGGCG ATCACGGCGT GGTGCTGCGC
GGCCCCAACG ACCTGATGTT CGACAGCCAC GGCGGCTTCT GGTTCACCGA CCATGGCAAG
GTCGATTATG CCAAGCGCTG TCACGACATC GTCGGCATCT TTTATGCCAA GGCCGACGGC
AGTTTTATCG AGGAAGTGAT CTTTCCGAGC TATAACCCCA ACGGCATCGG CCTCTCGCCC
GACGGGAGCA AGCTCTACGC CGCGGAAACC TATACCTGCC GGCTGACCCG GTTCAACATC
GTCGCGCCCG GCAAGGTCGA CGATGCCGCA GGACCGGGCG GCCCCGGCAT TCCGCTCTAT
CGCCCCGCGG GCTATAAGTT CTTCGACAGC CTTGCGATGG AAGCGAACGG CAATATCGCC
GTCGCGACGA TCGGCGAATG CGGGATCAGC GTCGTTTCGC CCACGGGCGA GCTGGTCGAG
TTCGTCGCCA CCGACGATAT TTTCACGACC AACATCGCCT TTGGCGGGCC CGACCGGCAG
GATGCCTATA TCACCCTGTC GGGAACCGGA AGACTGGTGA AGACACGCTG GACGCGGCCG
GGATTGCCGT TGCCATATTG A
 
Protein sequence
MAEFELIADG LRFPEAPVVM DDGSVIVTEV AAGRITRCWP GGRKQVIATP GGGPNGLAIG 
PDGKLYCCNN GGFNYVESNG YLAPHGIADD YSGGRIERID IATGAVEVLY QSGDHGVVLR
GPNDLMFDSH GGFWFTDHGK VDYAKRCHDI VGIFYAKADG SFIEEVIFPS YNPNGIGLSP
DGSKLYAAET YTCRLTRFNI VAPGKVDDAA GPGGPGIPLY RPAGYKFFDS LAMEANGNIA
VATIGECGIS VVSPTGELVE FVATDDIFTT NIAFGGPDRQ DAYITLSGTG RLVKTRWTRP
GLPLPY