Gene Sala_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2117 
Symbol 
ID4080092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2224365 
End bp2224964 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID638010493 
Producthypothetical protein 
Protein accessionYP_617159 
Protein GI103487598 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0310585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTC GCACGCTCTT CGCCAGCACT TTCTACGAAG CCGACATCGG CACCCCCGAC 
CTGCTCGATG CGCTGGAGGA AAGCTGCCGC CTGTTCGCCG AAGAGGATGG CGCCGGGAAA
GCGTGGAGCC GCGAGCATGG CTATAAGGGT TATACCAGCT ACGCGAGTCT CGGCGACCTG
CCCGAACGCG ACCCGGCCTT TTACGATCTG AAAAAACTGC TCGACAAGCA GGTGAAGGCC
TTTGCCGGGG CGTGCCACTT CGACCTTGCC AAACCGCTGA AACTCGACAG CCTGTGGGTC
AATATCCTGA AACCCGGCGG CACGCACAGC GGCCATATCC ACCCGCATTC CATCGTCTCG
GGCACCTTCT ACGTCGCCGT GCCGCCGGGG TCGGGCGCGC TCAAGCTCGA AGACCCGCGC
CTGCCGATGC TGATGGCGGC GCCGGGACGT ACCGACGATG CCCCCGAATA TCTCCGCCCC
TTCGTCTACG CCGAACCCGC CGCGGGCCGC GTCTTTTTGT GGGAAAGCTG GCTGAGGCAC
GAGGTGATGC CGCACGCGGG CAAGGGCGAG CGGATCAGCA TCAGCTTTAA CTATCGTTGA
 
Protein sequence
MPVRTLFAST FYEADIGTPD LLDALEESCR LFAEEDGAGK AWSREHGYKG YTSYASLGDL 
PERDPAFYDL KKLLDKQVKA FAGACHFDLA KPLKLDSLWV NILKPGGTHS GHIHPHSIVS
GTFYVAVPPG SGALKLEDPR LPMLMAAPGR TDDAPEYLRP FVYAEPAAGR VFLWESWLRH
EVMPHAGKGE RISISFNYR