| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2115 |
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| Symbol | |
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| ID | 4080090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2221824 |
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| End bp | 2222585 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638010491 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_617157 |
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| Protein GI | 103487596 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.538738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA AGCTCGCTCT CGTCACGGGC GGGCTCCACC GCGTCGGCGC CGCGATTTCG
GCGCGGCTCG CGCGCGAGGG CTATGCGCTG GCGATCCACA AGCGCAGCCC CGGCGAGGCC
GACCCGGTGC TGGCCGAAGC ACTCGCCGAG ACCGGCGCGG TCAGCCATCG CTTTGCCGCC
GACCTGTCCG ATCCGGCGGC GGTCGAGGCG CTGGTCCCCG CAGTGATCGA ACGATTCGGC
CGCGCGCCCG ACCTGCTCGT CAACAATGCG GCGCTGTTCG CCGAGGGCGA ATGGGCCGAC
CTGTCGGCGG CTGCGCTCGC CGAAATGATG CAGGTCAATC ACCATGCGCC GGTAATGCTC
GCCAGGGCGC TCGTCGCGGC GAGCGAGGGC AGGCGCCCCG CGATCGTCAA TATCGTCGAT
CAGCGCGTCG CGCATCCGGT GCCCGACCAG ATCGCCTACA GCCTGTCGAA AGCGGCGCTG
TGGCAGGCGA CGGCGACGCT GGCGGTCGCG TTCGGCAGCC GCGCGCGCGT CAACGCCGTC
GCGCCGGGGC TGACGCTGGC GACCGGCGAT TATTCGGCGG CGCAGGTCGA ACGGCTGGCA
AAGCGGATGC CGCTGGGCGC GCTGCCGACC CCCGCCGAGG TCGCCGACGC GGTCGCCTGG
CTCGCGCGCG CCGAGGCGGT GACAGGGCAG ACGATCTTTG TCGACGGCGG CGCGCATCTG
GCGCCGCTGG GACGCGATTT TGTGGCGCTG GACCGGGATT GA
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| Protein sequence | MTQKLALVTG GLHRVGAAIS ARLAREGYAL AIHKRSPGEA DPVLAEALAE TGAVSHRFAA
DLSDPAAVEA LVPAVIERFG RAPDLLVNNA ALFAEGEWAD LSAAALAEMM QVNHHAPVML
ARALVAASEG RRPAIVNIVD QRVAHPVPDQ IAYSLSKAAL WQATATLAVA FGSRARVNAV
APGLTLATGD YSAAQVERLA KRMPLGALPT PAEVADAVAW LARAEAVTGQ TIFVDGGAHL
APLGRDFVAL DRD
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