Gene Sala_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2095 
Symbol 
ID4080069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2201761 
End bp2202498 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID638010470 
Productphage Gp37Gp68 
Protein accessionYP_617137 
Protein GI103487576 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.192237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG GCAGTGCAAT TGAGTGGACC GACGCAACTT GGAATCCCGT TACGGGCTGC 
ACCAAGATCA CGACTGGCTG CGATAACTGT TATGCTGAGC GCTTTGCAGA GCGTTGGCGC
GGCATTCCTG GGCATCCCTT CGAAAATGGC TTCGACTTAG TTCTTCGACC AGAGCGGCTT
GACCAGCCGC TTCGCTGGAA ACGAAGCCGG ATGATCTTCG TCAATTCCAT GAGTGACCTC
TTCCACAAAG GTGTGCCCAA GTCGTTCGTT GACGCCGTGT TCGAGACAAT GGAAGCAGCT
GATTGGCATA TTTTTCAGGT ACTTACAAAG AGAAGTTCGC GGATGCGCGA TTACCTGAAA
AGTCGTTACG AGCAACGCAC GCCTCCGCAA CATATCTGGC TCGGCGTTTC TGTCGAGGAC
GCAAAAGGAG CAGCACGCAT AGAGCATCTC CGTGCTGCGC CCGCCAGCGT GCGCTTTCTT
TCCGTTGAAC CCCTTATCGG CCCTGTCGGA GAGGTCGATC TGTCAGATAT CCATTGGGTG
ATTGCCGGAG GAGAGAGTGG TCCCGGCGCT CGGATTCTTA ATATAGAATG GGCGCGACAA
ATCAGAGACG AATGCGAAAG GCAAAATGTA TCTTTCTTTT TCAAGCAGTG GGGAGGTATA
AGGCCAAAAA GTGGCGGTAG AGATCTTGAT GGGCGCGAGT GGAATGACTT TCCTTCTATG
AAAGCAGCTT CCGGATAA
 
Protein sequence
MADGSAIEWT DATWNPVTGC TKITTGCDNC YAERFAERWR GIPGHPFENG FDLVLRPERL 
DQPLRWKRSR MIFVNSMSDL FHKGVPKSFV DAVFETMEAA DWHIFQVLTK RSSRMRDYLK
SRYEQRTPPQ HIWLGVSVED AKGAARIEHL RAAPASVRFL SVEPLIGPVG EVDLSDIHWV
IAGGESGPGA RILNIEWARQ IRDECERQNV SFFFKQWGGI RPKSGGRDLD GREWNDFPSM
KAASG