Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2091 |
Symbol | |
ID | 4080065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2196655 |
End bp | 2198862 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010466 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_617133 |
Protein GI | 103487572 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.761777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.724468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATGGCC GTCCTCTCGC CACCCATTTT TTTCGCACAA TCGCGCAACA GTGTTGCAAT TCGCTCGCAT TAGCGTTAGC GGCGCCGCGA CGATCAGCGA ATCCAACAGG GGGCCATGTG AAGAAACTGT TTTTGCTTAC CGCTGCCGCG GCGACCTTTC CGGCGACGGC GGTCGCCAGC GAGGCCGAGC GCGAGGATGC GCGCACCATT TTGGTGATCG GCAAGTCGGA TGGCTATGTC GCCACCAATT CGGTCACCGC GACCAAGACC GACACACCGC TGATCGATGT GCCACAGACG ATTTCGGTGG TCACGCGCGA GCGGCTGGAC GATCAGGCGT CGCGTTCGAT CGCCGACGTC CTGCGCTATG TCCCCGGTAC CACCATCGGC CAGGGCGAGG GCAATCGCGA CCAGATCACC CTGCGCGGCC AGAACACGAC CGCCGACTTC TTTCTCGACG GGGTGCGCGA CGACGTCCAG TATTTCCGCA GCCTGTATAA CATCGAGCGG GTCGAGATAC TGAAAGGCCC CTTTGCGATG ATCTTTGGCC GCGGCGGCAG CGGCGGCGTC ATCAACCGGG TTCAGAAGAC GCCATCGGCC GATGCGCTGG CAGTTGGCGG CACGGTCAGC GCCAACAGCT TCGGCGCCTG GGACGTTTCG GCGGATGTCA ATGCGCCCCT TGGTGGCGGT GCGGCGTTCC GGCTCAACGC AAATTACGAG AGCCTCGACA ATCATCGCGA TTTCTTTGAA GGCGAACGTT ATGCCATCAA TCCCTATGTC GCGGCCGATC TGGGCCGCTG GAAGCTCGGA CTGTCCTACG AATATGTGAA CGACGACCGC GTGACCGACC GCGGGGTGCC GTCGATCGCG ACCGCGCCCG GACGGCCGAA CCGTCCGATC ACGGGCTATC GCGACACTTT CTTTGGTGTG CCGGGCGTCA ATCGCACGGG GCTGGAGGCC CATATCGTCA AGGCGCGGAT CGACGGCGAG CTGGCGGAGG CGCTGACATG GTCGACCACG CTGCTCTATG GCGACTATGA CAAATATTAT ACCAACGTCT TTGCCAATGG CCCCGCCACG AGCCCGACCG GCACCGTCGC CTTGTCGAGC TATACCGATG CGACCCGGCG TCAGAACTTT ATCGCGCAGA GCAACCTGCT TTGGGACGTC GACCTGGGCG GGATCGACAA CCGGATTCTG TTCGGCCTCG AATATGGCGA CCAGGATTCG ACGAACCAGC GCCGCAACGG CACGCTGTCG AACGGCACCC TCGACCTCGC CAACATCGTC TATCCGACGG TCAGTTTCGG CCCGCTGGTC CGCAACACCG ATTCGCGCGT CCGGTTCTTC TCGGCCTATG CCCAGGATCA GATTGCATTC GGATCGCATG TCGATCTGGT CCTTGGCGTG CGTTACGACC GGTTCGAGAT CAAGGGCACC GACCTGATCG GCGCCCCGCG TCCGTTCGCC CGTACCGACG AAAAACTGTC GCCGCGGATC GGCCTGATCC TCAAGCCACG GGAAAATGTT TCGATCTACG GCAGCTACAG CCGCTCCTTC CTCCCGCGGT CGGGCGATCA GTTCCTGACC CTGGCGCCCG CGTCGGGATC GTCCCCGGCG CAGGAGGATC TGACGCCCGA ACGGATGATC AATTACGAAG TCGGCGCCAA ATGGGACATC CGGCCCGATC TCAATGTCAC AGCGGCGCTG TTCCAGCTCG ACCGCAACAA CACCGCCGTG CCGGTCGCGG GCGTGCCGGG ATCGCAATTC CTGACCGATA CACGGACCAG GGGTGTCGAG CTGGCGCTGA CCGGCCGGAT TACGCCGAAC TGGCAGGTGA GCGGCGGCTA CACCTGGCAG GACGCCCATC GCAAGAATGA CGACAGCATC CGGCTCGGCC AGGTGCCCGA ACATCAGTTC GCGCTGTGGA ACCGCTATGA TTTCAACCGC AATGTCGGGA TGGGTCTGGG CGTTGTCCAT CAGTCGAGCC AGTTCGCCGC GATTCGCACC GCGCCCACGA CCACCCGGCT GCCCGCCTTC ACGCGCGTCG ATGCGGCGCT GTTCGTCAAG GCGAACGAGC GGGTTGCATT TCAGGTCAAT GTCGAAAATC TGTTCGACGA GCGCTATTTT TCGGACGCGC ACAACCTCAA CAACATCACG CCGGGGGCGC CGATCAACGC CCGCTTCACG GCGCGCGTCA AATATTGA
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Protein sequence | MHGRPLATHF FRTIAQQCCN SLALALAAPR RSANPTGGHV KKLFLLTAAA ATFPATAVAS EAEREDARTI LVIGKSDGYV ATNSVTATKT DTPLIDVPQT ISVVTRERLD DQASRSIADV LRYVPGTTIG QGEGNRDQIT LRGQNTTADF FLDGVRDDVQ YFRSLYNIER VEILKGPFAM IFGRGGSGGV INRVQKTPSA DALAVGGTVS ANSFGAWDVS ADVNAPLGGG AAFRLNANYE SLDNHRDFFE GERYAINPYV AADLGRWKLG LSYEYVNDDR VTDRGVPSIA TAPGRPNRPI TGYRDTFFGV PGVNRTGLEA HIVKARIDGE LAEALTWSTT LLYGDYDKYY TNVFANGPAT SPTGTVALSS YTDATRRQNF IAQSNLLWDV DLGGIDNRIL FGLEYGDQDS TNQRRNGTLS NGTLDLANIV YPTVSFGPLV RNTDSRVRFF SAYAQDQIAF GSHVDLVLGV RYDRFEIKGT DLIGAPRPFA RTDEKLSPRI GLILKPRENV SIYGSYSRSF LPRSGDQFLT LAPASGSSPA QEDLTPERMI NYEVGAKWDI RPDLNVTAAL FQLDRNNTAV PVAGVPGSQF LTDTRTRGVE LALTGRITPN WQVSGGYTWQ DAHRKNDDSI RLGQVPEHQF ALWNRYDFNR NVGMGLGVVH QSSQFAAIRT APTTTRLPAF TRVDAALFVK ANERVAFQVN VENLFDERYF SDAHNLNNIT PGAPINARFT ARVKY
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