Gene Sala_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2087 
Symbol 
ID4080061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2192584 
End bp2192916 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content66% 
IMG OID638010462 
ProductXRE family transcriptional regulator 
Protein accessionYP_617129 
Protein GI103487568 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.5089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.765072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGA CGGCCAAGGA TAAGGGCTAT CGCAGCGAGA TCGCGGGCGC GATCCATGAG 
ATGATCAGCG ACGCGCATGA CGCGGGCGTC GTGTCGCGCA CGACTTTGCG CAGCTTTGAC
GAAGCGTGCC TTGCCCCGGC GCCGACGCTG GCGGGCGACG AAATCCGCGC GATCCGCGAG
CGCGAGCATG TGTCGCAACC GGTGTTCGCC GCCTATCTCA ACGTCTCGCG CAATCTGGTG
TCGGACTGGG AACGCGGCGT AAAGCGGCCG GGCGGCCCCG CCCTGCGGCT GCTCTCCATC
ATCCAGCGCA AGGGATTGCA AGCCGTCGCA TGA
 
Protein sequence
MTRTAKDKGY RSEIAGAIHE MISDAHDAGV VSRTTLRSFD EACLAPAPTL AGDEIRAIRE 
REHVSQPVFA AYLNVSRNLV SDWERGVKRP GGPALRLLSI IQRKGLQAVA