| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2082 |
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| Symbol | |
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| ID | 4080019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2187476 |
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| End bp | 2188591 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638010457 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_617124 |
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| Protein GI | 103487563 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.565949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC TCGCCCCCAG CCGTCCCGAG GCCGAAGCTG CGGCGCCGCC GCCCGCCGCG
CCCAGGGCCG ACCCCTTGCC GTCCCCCGCC GCCGATACTG CGGCGCGCCC CGGCTGGCGG
ACGCGCCTGA TCATGTTCGG CCTGCCGCTG GCGCTCGTCG CGGGCGGCGC CGGCTGGTGG
CTGCTGAGCG GCGGGTCGGT GTCGACCGAC AATGCCTATG TCCAGATGGA CAAGGTCTCG
GTCGCCGCCG AGGTCGGCGG GCGCATCACC GAAGTAGCCG TCCGCGACGG CGAGCAGGTC
GCCAAGGGGC AACTCCTTTT CCGCATCGAC AGCGAACCCT ATGCGCTGAA CGTCGCTCAA
GCCACCGCCG CCATCGACGC GGCGCGGGTC GAGGTCGGCA ATCTCGCCGC GGGCGCGAAC
ACATCCGCCG TCGAAATCGC CGCGGCGCGC GAGGAGGTGA GATTCGCCCA GGTCAATTTC
GAGCGGCAGG CGGCGCTGAT GGAAAAGGGC TTCACGACGC GCGCCGCCTA TGATGCGTCG
CGCCACGCGC TCGCCCAGGC ACGCGAGCGC GTGCGGCAGG CCGAGGCCGC CGCGGTGGAA
GCGCGCACCA GGCTCGCCGC CGGTCCCGCA AGCGGCATCA ATCCGCAGGT CGAGGCCGCG
CGCGTCCAGC GCGCGCAGGC CGAGGTCAAC CTCGCGCGCA CCAGCGTCCG CGCGCCCAGC
GCGGGCCGTG TCGCGCAGGC CGACCGGCTG CAGGTCGGAC AGGCGATGGT CGCCGGGCTG
CCCGCGCTCA CCCTCGTCGA CACCGCGCAC CCGTGGGTCG AAGCCAATTT CAAGGAAACC
GACCTCGCCG ACATGCGGGT CGGCCAGCGC GCCGAAATCC GCTTCGACGC CTATCCGGGA
CTCAAAGTCC GCGGCCATGT GCTGATGATC GGCGCGGGTA CGGGGAGCGA GTTCTCGGTG
CTTCCGGCGC AGAACGCCAC CGGCAACTGG GTCAAGGTGA CGCAGCGCGT CCCCGTGCGC
ATCGCCTTCG ACGAAAAGCC CGCGCGCGAC ATGATCGCCG GGCTGTCGGC CGAGGTGACG
GTGTTTACCG GCGGCGGGAC GGTGGCGGGG AAGTAG
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| Protein sequence | MDQLAPSRPE AEAAAPPPAA PRADPLPSPA ADTAARPGWR TRLIMFGLPL ALVAGGAGWW
LLSGGSVSTD NAYVQMDKVS VAAEVGGRIT EVAVRDGEQV AKGQLLFRID SEPYALNVAQ
ATAAIDAARV EVGNLAAGAN TSAVEIAAAR EEVRFAQVNF ERQAALMEKG FTTRAAYDAS
RHALAQARER VRQAEAAAVE ARTRLAAGPA SGINPQVEAA RVQRAQAEVN LARTSVRAPS
AGRVAQADRL QVGQAMVAGL PALTLVDTAH PWVEANFKET DLADMRVGQR AEIRFDAYPG
LKVRGHVLMI GAGTGSEFSV LPAQNATGNW VKVTQRVPVR IAFDEKPARD MIAGLSAEVT
VFTGGGTVAG K
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