| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2079 |
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| Symbol | groEL |
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| ID | 4080016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2183461 |
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| End bp | 2185080 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010454 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_617121 |
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| Protein GI | 103487560 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.131312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.353745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA AGGAAGTGAA ATTTGCGTCG GACGCGCGTG ATCGCATGCT GCGCGGCGTG
GATACGCTTG CGAATGCAGT GAAGGTCACG CTCGGCCCCA AGGGTCGCAA CGTGGTTATC
GAAAAGAGTT TCGGCGCGCC GCGCATCACC AAGGACGGCG TCACTGTCGC CAAGGAGATC
GAACTCGCCG ACAAGTTCGA GAACATGGGT GCGCAGATGC TGCGCGAGGT CGCCTCGAAA
CAGAATGACA AGGCCGGCGA CGGCACCACC ACCGCAACCG TGCTTGCGCA GGCGATCGTC
CGCGAGGGAT CGAAAGCGGT GGCCGCGGGC ATGAACCCGA TGGACGTGAA GCGCGGCATC
GACCTCGCCG TGAAGGCCGT GGTGAAGGAT CTCGAAACCC ATGCCAAGAA GGTCAGCGCC
AACAGCGAAA TCGCCCAGGT CGCAACCATC TCGGCGAACG GCGACGAGGA GGTGGGCCGC
ATCCTCGCCG AAGCGATGGA CAAGGTCGGC AACGAAGGCG TCATCACCGT CGAGGAGGCG
AAGAGCCTGG CGACCGAACT CGAAACGGTC GAAGGCATGC AGTTCGACCG CGGCTATCTG
TCGCCCTATT TCATCACCAA TGCCGAAAAG CTGAAGGTCG AACTCGACGA CCCCTATATC
CTGATCCACG AAAAGAAGCT TTCGAACCTG CAGGCGATGC TGCCGCTGCT GGAAGCGGTC
GTGCAGTCGG GCAAGCCGCT GCTCATCATC GCCGAAGATG TCGAGGGCGA GGCATTGGCA
ACGCTGGTCG TCAACCGCCT GCGCGGCGGG CTCAAGGTCG CCGCGGTCAA GGCGCCGGGC
TTTGGCGACC GTCGCAAGGC GATGCTGGAA GATATCGCGA TCCTCACCGG CGGCAATGTC
GTGAGCGAAG ACCTGGGCAT CAAGCTGGAG AATGTCACGG TCAACATGCT CGGGCGCGCC
AAGAAGGTCG TGATCGACAA GGATAATACG ACGATCGTCG ACGGCGTCGG CGCCAGGACC
GACATCGACG CACGCATCGC CCAGATTCGC CAGCAGATCG ACACGACGAC CAGCGACTAT
GACCGCGAGA AGCTGCAGGA ACGCCTCGCC AAGCTCGCGG GTGGCGTTGC GGTGATCCGC
GTCGGCGGCG CAACCGAGGT CGAAGTCAAG GAGCGCAAGG ATCGCGTCGA CGACGCGCTT
CACGCGACGC GTGCTGCGGT GGAAGAAGGC ATTCTTCCCG GCGGCGGCAT TGCACTGCTC
CGCGCGCTCA AGGCGCTCGA CGGCCTCAAG GCGGCGAACG ACGATCAGCA GTCCGGCATC
GACATCGTCC GCCGCGCGCT CCGCGCTCCG GCGCGCCAGA TCGCCGACAA CGCGGGCGAG
GATGGTGCGT GGATCGTCGG CAAACTGCTC GAAAGCAGCG ACTATAACTG GGGCTTCAAT
GCTGCCACCG GCGAATATGA AGACCTCGTC AAAGCGGGTG TGATCGACCC GGCGAAGGTC
GTCCGCACGG CGCTGCAGGA CGCGGCCTCA GTCGCCGCGC TGCTGATCAC GACCGAGGCA
CTCGTCGCCG AGCTGCCGAA GGAAGAGAAA GCCGCGCCGA TGCCGGCGAT GGACTTCTGA
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| Protein sequence | MAAKEVKFAS DARDRMLRGV DTLANAVKVT LGPKGRNVVI EKSFGAPRIT KDGVTVAKEI
ELADKFENMG AQMLREVASK QNDKAGDGTT TATVLAQAIV REGSKAVAAG MNPMDVKRGI
DLAVKAVVKD LETHAKKVSA NSEIAQVATI SANGDEEVGR ILAEAMDKVG NEGVITVEEA
KSLATELETV EGMQFDRGYL SPYFITNAEK LKVELDDPYI LIHEKKLSNL QAMLPLLEAV
VQSGKPLLII AEDVEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLE DIAILTGGNV
VSEDLGIKLE NVTVNMLGRA KKVVIDKDNT TIVDGVGART DIDARIAQIR QQIDTTTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK ERKDRVDDAL HATRAAVEEG ILPGGGIALL
RALKALDGLK AANDDQQSGI DIVRRALRAP ARQIADNAGE DGAWIVGKLL ESSDYNWGFN
AATGEYEDLV KAGVIDPAKV VRTALQDAAS VAALLITTEA LVAELPKEEK AAPMPAMDF
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