Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2074 |
Symbol | |
ID | 4080011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2181312 |
End bp | 2181833 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010449 |
Product | heat shock protein Hsp20 |
Protein accession | YP_617116 |
Protein GI | 103487555 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.145284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.308358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTC GTGATCTCAT TCCCTGGAGC CGGCAGGACA ATCGGCTCCC CATATCCACG GACCCGCAGG GCGGCGGGGA CTATGACGCG TATCCGCTGC TTTCGCTGCA CCGCGAGGTA AACCGCCTGT TCGACGATAT GTTTCGCGGC TTTGGCGGCG CGCTGCCGGG GCGGCTCGAC CCGCGCGGCG TGTGGCCCCA TGTCGAGCTT AGTGAAACCG ACAGCGAGGT CCGCATTGCC GCCGAACTGC CGGGGCTTGA CGAGAAGGAC GTCGAGCTTT GCATCGAGGA GGGCGTACTG ACCCTGCGCG GCGAGAAACG TGCGGACGTC GAAGACCGCG ATCGCGGCTA TTCGGAGCGA AGCTATGGCC GCTTTGAACG GCGCATCAGC CTGCCGCAGG GTATCGACCG CGAACAGGCG AACGCGACGT TCAGGAACGG CGTGCTCACC GTGCGGCTGC CCCGGACGGA GGCGGCGAGG AAAAATGTTC GCCGCATCCC GATCAATGGC AAAGCCGCCT GA
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Protein sequence | MSLRDLIPWS RQDNRLPIST DPQGGGDYDA YPLLSLHREV NRLFDDMFRG FGGALPGRLD PRGVWPHVEL SETDSEVRIA AELPGLDEKD VELCIEEGVL TLRGEKRADV EDRDRGYSER SYGRFERRIS LPQGIDREQA NATFRNGVLT VRLPRTEAAR KNVRRIPING KAA
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