Gene Sala_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2074 
Symbol 
ID4080011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2181312 
End bp2181833 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID638010449 
Productheat shock protein Hsp20 
Protein accessionYP_617116 
Protein GI103487555 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.145284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.308358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTC GTGATCTCAT TCCCTGGAGC CGGCAGGACA ATCGGCTCCC CATATCCACG 
GACCCGCAGG GCGGCGGGGA CTATGACGCG TATCCGCTGC TTTCGCTGCA CCGCGAGGTA
AACCGCCTGT TCGACGATAT GTTTCGCGGC TTTGGCGGCG CGCTGCCGGG GCGGCTCGAC
CCGCGCGGCG TGTGGCCCCA TGTCGAGCTT AGTGAAACCG ACAGCGAGGT CCGCATTGCC
GCCGAACTGC CGGGGCTTGA CGAGAAGGAC GTCGAGCTTT GCATCGAGGA GGGCGTACTG
ACCCTGCGCG GCGAGAAACG TGCGGACGTC GAAGACCGCG ATCGCGGCTA TTCGGAGCGA
AGCTATGGCC GCTTTGAACG GCGCATCAGC CTGCCGCAGG GTATCGACCG CGAACAGGCG
AACGCGACGT TCAGGAACGG CGTGCTCACC GTGCGGCTGC CCCGGACGGA GGCGGCGAGG
AAAAATGTTC GCCGCATCCC GATCAATGGC AAAGCCGCCT GA
 
Protein sequence
MSLRDLIPWS RQDNRLPIST DPQGGGDYDA YPLLSLHREV NRLFDDMFRG FGGALPGRLD 
PRGVWPHVEL SETDSEVRIA AELPGLDEKD VELCIEEGVL TLRGEKRADV EDRDRGYSER
SYGRFERRIS LPQGIDREQA NATFRNGVLT VRLPRTEAAR KNVRRIPING KAA