| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2073 |
|---|
| Symbol | |
|---|
| ID | 4080010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2180741 |
|---|
| End bp | 2181220 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638010448 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_617115 |
|---|
| Protein GI | 103487554 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.1322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.515906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGCA ACTTTGACTT TACGCCTTAT CGGCGTTCCA CGGTCGGCTT CGACCGTCTT
TTCGACCTGC TCGAAGCCGG AACGCGCAGC GATGCCGCCG ATGGCTATCC GCCCTTCGAC
ATCGTGCGGG AGGGTGAGGA CAGCTATCGC ATCACGCTTG CGGTCGCAGG TTTTCGTCCC
GACGAAATCG AGGTGATCGC GCAGCAGAAC CAGCTCACCG TCACCGGCAA GCGCGCCGAG
GATGACAGCC AGGGCAAATA TCTGCACCGC GGCATCGCCG CACGCGACTT CGAGCGACGC
TTCCAGCTTG CCGATTTCAT CGAGGTCGGC GAGGCGGATT TCGACAATGG CCTGCTTTCG
ATCGAGCTGA AGCGCGTCGT CCCCGAAGCG ATGAAGCCCC GCAAGATCGC GATCGGCAAC
GGCAAAGCCG CATCCGAACG CATCGAATCA CGCCGGGACA AGGCGCTCGA ATCCGCCTGA
|
|---|
| Protein sequence | MRSNFDFTPY RRSTVGFDRL FDLLEAGTRS DAADGYPPFD IVREGEDSYR ITLAVAGFRP
DEIEVIAQQN QLTVTGKRAE DDSQGKYLHR GIAARDFERR FQLADFIEVG EADFDNGLLS
IELKRVVPEA MKPRKIAIGN GKAASERIES RRDKALESA
|
|---|
| |