Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2064 |
Symbol | |
ID | 4080131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2173981 |
End bp | 2175315 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010438 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_617106 |
Protein GI | 103487545 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.628869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCG ACTCCCCCAA AACCTTTCAC GTCAAATCCT TCGGCTGCCA GATGAACGTC TATGACGGCG AGCGCATGGC CGAGATGCTG GGCGCTGAGG GCTATGTGCC CGCCGCTGAC GGCGCCGACG CCGATCTGGT CGTGCTGAAC ACCTGTCACA TTCGCGAGAA AGCCGCCGAG AAAGTCTATT CGGACATCGG ACGACTGAAG CGTGACGATG GCAGCACGCC GACGATTGCC GTCGCGGGCT GCGTCGCGCA GGCCGAGGGA GCGGAGATTG CGCGGCGTGC GCCGTCGGTC GATGTCGTCG TCGGACCGCA GGCCTATCAC CGTCTGCCCG AACTGATCGC GCGTGCCGAG CGGGGTGAGA AGGCGATCGA CCTCGACATG CCGGCGGAAA GCAAGTTCGG CGCGCTGCCA AAGCGTAGCG GAAACCAGCG CCCGACCGCC TTCCTGACCG TGCAGGAAGG CTGCGACAAA TTCTGCACCT ATTGCGTCGT GCCCTATACG CGCGGGGCGG AAATCAGCCG ACCCTTCGCC GACCTGATCG CCGAGGCGCG CGCGCTCGTC GCGGGCGGGG TGCGCGAGAT CACGCTGCTG GGGCAGAATG TCAACGCCTG GATCGGCGAG GATGCCAAGG GCCGGGCAAT CGGGCTCGAC GGGCTGATCC GCGAACTGGC GAAAGAGGAC GGGCTCGAAC GCATCCGCTA CACCACCAGC CACCCCAACG ACATGACCGA CGGGCTGATC GTCGCGCATG GCGAGGTCGA CAAGCTGATG CCCTTCCTCC ACCTGCCGGT GCAGGCGGGC AGCGACCGCA TCCTCGCCGC GATGAACCGC AGCCATAGTG TCGAATCCTA TCTGAAGGTC ATCGAGCGCG TCCGTGAAGC GCGCCCCGAC ATCGCCATCT CGGGCGACTT CATCGTCGGT TTTCCCGGCG AGAGCGAGGC CGATTTCGCG GCAACGCTCG ATATCGTTCG CGCCACTCGC TATGCGATGG CGTACAGCTT CAAATATTCG CGCCGCCCCG GCACGCCGGC GGCGACGATG GACGATCAGA TCGACGAAGC GGTGATGAAC GAGCGGCTCC AGCGGTTGCA GGCTTTGCTC AACGAGCAGC AGCAGGCGTT CAACGAAGCG ACCGTCGGCC GCACGACCCG CCTGCTCCTC GAACGCAAGG GCAAGCGCGA AGGCCAGCTG ATCGGCAAGT CGCCGTGGCT GCAATCGGTG CATGTCACCG CGCCGGGGCT GGCGATCGGC GACATGATCG ACGTGCGCAT CACCTCGGCC GGCCCGAACA GCCTGGGCGC CGAGCCGCTG ATGGCGATCG CCTAG
|
Protein sequence | MKSDSPKTFH VKSFGCQMNV YDGERMAEML GAEGYVPAAD GADADLVVLN TCHIREKAAE KVYSDIGRLK RDDGSTPTIA VAGCVAQAEG AEIARRAPSV DVVVGPQAYH RLPELIARAE RGEKAIDLDM PAESKFGALP KRSGNQRPTA FLTVQEGCDK FCTYCVVPYT RGAEISRPFA DLIAEARALV AGGVREITLL GQNVNAWIGE DAKGRAIGLD GLIRELAKED GLERIRYTTS HPNDMTDGLI VAHGEVDKLM PFLHLPVQAG SDRILAAMNR SHSVESYLKV IERVREARPD IAISGDFIVG FPGESEADFA ATLDIVRATR YAMAYSFKYS RRPGTPAATM DDQIDEAVMN ERLQRLQALL NEQQQAFNEA TVGRTTRLLL ERKGKREGQL IGKSPWLQSV HVTAPGLAIG DMIDVRITSA GPNSLGAEPL MAIA
|
| |