| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2060 |
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| Symbol | |
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| ID | 4080127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2170504 |
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| End bp | 2171373 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010434 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_617102 |
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| Protein GI | 103487541 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.868848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGA CGCGCTCCGG CGATGCGGCG GGCGCGGCGG GTCTTTTCGA CCCGCTGCGC
CCGATGCTCA CGCGCGTTGC CTATCGAATG CTGGGTTCGG TCGCCGATGC CGAGGATGTC
GTGCAGGATG CCTTCATCCG CTGGCTTGGC ACCGATCGCG GTGCGGTGCG CGAGCCCGCC
GCCTTCCTCC GCCGTACCGT GACGCGGCTC TGCCTCGACC AGCTCAAATC GGCGCGGGCA
CAGCGCGAAA CCTATATCGG CCCCTGGCTC CCCGACCCGC TGGTCGAGGA GGACGAGGCC
GACGACGATG TCACGCTGCC GCTGATGCTC GCGCTCGAAC GGCTCTCCCC CCTGGAGCGC
GCGGCTTTCC TGCTCCACGA CGTGTTCGGC GTCGGCTTCG ACGAGGTCGC GGCCACGATC
GACCGCGATC CCGCCGCGGC GCGCCAGCTT GCCGCGCGGG CGCGCTCCCA CGTCCGCGAC
GCGCGCCCCC GCTACAAGCT CGAAAAAGCG CGGGGGCTGG AAATCGCGCG CGCCTTTTTC
GAGGCATCGC GCAGCGGCGA TATGGAGACG CTCGGCGCCC TGCTGGCCGC CGATGTCGGC
ATGTGGGCCG ATGGCGGCGG CAAGCGCCCG GCGGCCGCGG TCCCGATCCT CGGAAGGAAA
CTGGTGTTGA CGGTTCAGCG CAGCATCGCG GTTCTGCTGC GCAAATATGG CTCGACGCTG
GTTCACACCG GCATCATCAA CGGCCTGCCG GGCTTCGTGA CGCGCGAGGC CGACGGCGAG
CTTCAGACCA CCGCGCTGGC GATCGAGGAC GGCAAGATCA CCGGCATTTA TGTCATGCGC
AACCCGGACA AGCTGCGGCA TGTGCATTGA
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| Protein sequence | MAATRSGDAA GAAGLFDPLR PMLTRVAYRM LGSVADAEDV VQDAFIRWLG TDRGAVREPA
AFLRRTVTRL CLDQLKSARA QRETYIGPWL PDPLVEEDEA DDDVTLPLML ALERLSPLER
AAFLLHDVFG VGFDEVAATI DRDPAAARQL AARARSHVRD ARPRYKLEKA RGLEIARAFF
EASRSGDMET LGALLAADVG MWADGGGKRP AAAVPILGRK LVLTVQRSIA VLLRKYGSTL
VHTGIINGLP GFVTREADGE LQTTALAIED GKITGIYVMR NPDKLRHVH
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