| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2057 |
|---|
| Symbol | |
|---|
| ID | 4080124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2166468 |
|---|
| End bp | 2167001 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638010431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617099 |
|---|
| Protein GI | 103487538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.858236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.810122 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCC TGGCTCTTGC CGCTCTTGCC GCCGCTTCGC TCAGCCTGAC CGGCTGCGGC
GAAAATCTGG GCGCGGGGCA ACAACTCAAC GTCGTCAGCG GCCATGTCGT GATGGGTGCG
ACGCCCGACC GCCCCGCGGT CGGCTATTTC CGCGTCGAGG GCGGCCCGCG CGACGTCGAA
CTGGTGGCGG TGACCGCCGA CCTCGCGCAG CGCGTCGAGA TGCACGAAAG TGTGCGCGAA
AACGGCATGA TGGTGATGAA GCCGCTCGAA CGCGCGGCCG TGCCCGCCAA CGGCGAACTC
GTCTTCAAAC AGGGCGGCAA GCATCTGATG ATCTGGGGCA TCAACGGCGC CGCGGTGCGC
GCGGGCAAGC TGCCGATGGC GTTCGTCTTC ACCAACAACA ATAATGAACG CATCCTCTTC
GACATGGTGA TCAAGCCCGC CGAAGGCGGC GCGGGCGGCG AAGCGGCGAT GGACCATGAT
GCGATGGGGC ACGGACCGAT GGACAAGGGC GGGGCGGACG CAGCCGCGAA GTAG
|
|---|
| Protein sequence | MKPLALAALA AASLSLTGCG ENLGAGQQLN VVSGHVVMGA TPDRPAVGYF RVEGGPRDVE
LVAVTADLAQ RVEMHESVRE NGMMVMKPLE RAAVPANGEL VFKQGGKHLM IWGINGAAVR
AGKLPMAFVF TNNNNERILF DMVIKPAEGG AGGEAAMDHD AMGHGPMDKG GADAAAK
|
|---|
| |