Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2056 |
Symbol | |
ID | 4080123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2165865 |
End bp | 2166341 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010430 |
Product | hypothetical protein |
Protein accession | YP_617098 |
Protein GI | 103487537 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.692686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.331107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGCC ACTCGCGCCC CCTGACCAGC GGCGAAATCG CGCTGGCCCG CAGCGTGTTC GGCGACGCGA TCGCCTATGA CCGCGTGCGC GTGAACCACC ATAAATGGGC CTTTTTCCAG CCGCGCCACA TCGTCATGGC GCCGATGGGC CACCTGCATT TCAACCCGCA CGGCGACCTT TATTGCGACG ATTTCGGCGC CGCGCCGCAG CGGCTGCAAG GGCTGTTCAT CCACGAAATG ACGCATGTGT GGCAGGCGCA GACGCGCGGC CGCTGGTATC TGGTGCTGAT GCGCCATCCC TTCGCGACCT ATCGCTACAG TCTGAAACCC GGCTGGCCGC TCGAACGCTA TGGCCTCGAA CAGCAGGCCG AGATCGTGCG CCACTATTGG CTGCTGACGC AGGGCGTGGT CGTCGGCGGC GCGCCGGGGG TCGAGGCGTA TAGGGCGATT TTGCCCGATT CGTGGCGGGC GGCGTGA
|
Protein sequence | MSRHSRPLTS GEIALARSVF GDAIAYDRVR VNHHKWAFFQ PRHIVMAPMG HLHFNPHGDL YCDDFGAAPQ RLQGLFIHEM THVWQAQTRG RWYLVLMRHP FATYRYSLKP GWPLERYGLE QQAEIVRHYW LLTQGVVVGG APGVEAYRAI LPDSWRAA
|
| |