Gene Sala_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2056 
Symbol 
ID4080123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2165865 
End bp2166341 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID638010430 
Producthypothetical protein 
Protein accessionYP_617098 
Protein GI103487537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.692686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.331107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCC ACTCGCGCCC CCTGACCAGC GGCGAAATCG CGCTGGCCCG CAGCGTGTTC 
GGCGACGCGA TCGCCTATGA CCGCGTGCGC GTGAACCACC ATAAATGGGC CTTTTTCCAG
CCGCGCCACA TCGTCATGGC GCCGATGGGC CACCTGCATT TCAACCCGCA CGGCGACCTT
TATTGCGACG ATTTCGGCGC CGCGCCGCAG CGGCTGCAAG GGCTGTTCAT CCACGAAATG
ACGCATGTGT GGCAGGCGCA GACGCGCGGC CGCTGGTATC TGGTGCTGAT GCGCCATCCC
TTCGCGACCT ATCGCTACAG TCTGAAACCC GGCTGGCCGC TCGAACGCTA TGGCCTCGAA
CAGCAGGCCG AGATCGTGCG CCACTATTGG CTGCTGACGC AGGGCGTGGT CGTCGGCGGC
GCGCCGGGGG TCGAGGCGTA TAGGGCGATT TTGCCCGATT CGTGGCGGGC GGCGTGA
 
Protein sequence
MSRHSRPLTS GEIALARSVF GDAIAYDRVR VNHHKWAFFQ PRHIVMAPMG HLHFNPHGDL 
YCDDFGAAPQ RLQGLFIHEM THVWQAQTRG RWYLVLMRHP FATYRYSLKP GWPLERYGLE
QQAEIVRHYW LLTQGVVVGG APGVEAYRAI LPDSWRAA