Gene Sala_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2051 
Symbol 
ID4080118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2161742 
End bp2162170 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID638010425 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_617093 
Protein GI103487532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.5089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG ACAAGGCTCT GCCGCTCTTG GGAATGGTGC TCGTCACGCA CGGCCGCCTC 
GCCGAGGAAA TGGTGCGCGC GATGGAGCAT GTCGTCGGCC CGCAGCGCGC CGTCGCCACC
GTGTGCATCG GCCCCAACGA CAATATGGAG ATGCGGCGCC AGGAAATCGC CGACGCGATC
CGCAGCGTCG ACGAGGGACG CGGCGTCGTG ATGCTGACCG ACCTGTTCGG CGGCACCCCC
TCGAACCTGG CGATCAGCCT GCTCGAAACC GGGCGGACCG AGGTGATCGC CGGGGTCAAC
CTGCCCATGC TGATCCGCCT CGAAAGCGCG CGCAAGTCGA TGGAGCTGCG CGCCGCGGTG
ATCGCGGCCA AGGAAGCGGG GCAGAAATAT ATTTCGGTCG CGTCCGAAAT GCTGGGAGTG
GGACCGTGA
 
Protein sequence
MPNDKALPLL GMVLVTHGRL AEEMVRAMEH VVGPQRAVAT VCIGPNDNME MRRQEIADAI 
RSVDEGRGVV MLTDLFGGTP SNLAISLLET GRTEVIAGVN LPMLIRLESA RKSMELRAAV
IAAKEAGQKY ISVASEMLGV GP