Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2049 |
Symbol | |
ID | 4080116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2160334 |
End bp | 2160780 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638010423 |
Product | HPr kinase |
Protein accession | YP_617091 |
Protein GI | 103487530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.824494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.123251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCGA GCCGGACCAG ACCCGAAATC GTCAACATCC ACGCGAGCTG CGTTGCCGCA GGCAATGGCG GGGTGCTGAT CCTCGGCAAT TCGGGGCAGG GCAAGTCCGA CCTCGCGCTG CGCCTCATCG ACCGCGGCGC CAGGCTCGTC GCCGACGATC GCTGCGACAT CTGGTTCGAC CGCGGCCGAC TGTGGTGCCG GCCGCCCGAA AATCTTGCGG GCAAGCTGGA AGTGCGCGGC ATCGGCATCG TCGAGCGCCC GTGGACGGCG CCGGTGCCGC TGGCGCTCGC GGTGCGGCTG ACCGACCGTT ACGACCGGAT GCCCGCGGTG GGGCAGGTCG AAACGGTGGC GGGCCATCCG CTTCCCGCGC TGCTGCTGTC GGCGTTCGAG GTGTCGGCGC CGATCAAGAT CATGCTCGCG CTCGAACGGC TGGCGCCCGC GGCATGA
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Protein sequence | MLPSRTRPEI VNIHASCVAA GNGGVLILGN SGQGKSDLAL RLIDRGARLV ADDRCDIWFD RGRLWCRPPE NLAGKLEVRG IGIVERPWTA PVPLALAVRL TDRYDRMPAV GQVETVAGHP LPALLLSAFE VSAPIKIMLA LERLAPAA
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