Gene Sala_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2049 
Symbol 
ID4080116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2160334 
End bp2160780 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID638010423 
ProductHPr kinase 
Protein accessionYP_617091 
Protein GI103487530 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.824494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGA GCCGGACCAG ACCCGAAATC GTCAACATCC ACGCGAGCTG CGTTGCCGCA 
GGCAATGGCG GGGTGCTGAT CCTCGGCAAT TCGGGGCAGG GCAAGTCCGA CCTCGCGCTG
CGCCTCATCG ACCGCGGCGC CAGGCTCGTC GCCGACGATC GCTGCGACAT CTGGTTCGAC
CGCGGCCGAC TGTGGTGCCG GCCGCCCGAA AATCTTGCGG GCAAGCTGGA AGTGCGCGGC
ATCGGCATCG TCGAGCGCCC GTGGACGGCG CCGGTGCCGC TGGCGCTCGC GGTGCGGCTG
ACCGACCGTT ACGACCGGAT GCCCGCGGTG GGGCAGGTCG AAACGGTGGC GGGCCATCCG
CTTCCCGCGC TGCTGCTGTC GGCGTTCGAG GTGTCGGCGC CGATCAAGAT CATGCTCGCG
CTCGAACGGC TGGCGCCCGC GGCATGA
 
Protein sequence
MLPSRTRPEI VNIHASCVAA GNGGVLILGN SGQGKSDLAL RLIDRGARLV ADDRCDIWFD 
RGRLWCRPPE NLAGKLEVRG IGIVERPWTA PVPLALAVRL TDRYDRMPAV GQVETVAGHP
LPALLLSAFE VSAPIKIMLA LERLAPAA