| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2041 |
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| Symbol | rplU |
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| ID | 4079938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2151975 |
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| End bp | 2152469 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010415 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_617083 |
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| Protein GI | 103487522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.214914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAA TCGTGCGCAC GGGCGGAAAG CAGTATCGCG TTGCCGCCGG AGACAAGATC
GCCGTCGAGA AGATCGAGGG TGAAGCCGGC GACACCGTGT CGCTGGGCGA CGTCCTGCTG
GCCGGAGACG GCGGCGAGGT GAAGGATGCG AAGGGTCTGA CCGTGTCGGC CGAGATCATC
GCCCAGACGC GCGGCGAAAA GGTCATCGTG TTCAAGAAGC GCCGTCGGCA CAATTATCGC
CGCCGCAACG GCCACCGCCA GTCGCTGACG CTGCTGCGCA TCCTCGCCGT CGGCGAGGCC
AGGAAGGCCG CGCCGAAAAA GGAAGCCGCT CCGAAGGAAG AGGCCGCTCC GAAGGCCGAA
GCCAAGGCCG CTGCACCCGC GAAGGAAGCC GCGCCGAAAA AGGAAGCCGC GCCCAAGAAG
GCTGCGGCCC CCAAGGCCGA AGCCGCCGAA AAGAAGCCCG CCGCCAGGAA GGCGGCCCCC
AAGAAGGACG CCTGA
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| Protein sequence | MFAIVRTGGK QYRVAAGDKI AVEKIEGEAG DTVSLGDVLL AGDGGEVKDA KGLTVSAEII
AQTRGEKVIV FKKRRRHNYR RRNGHRQSLT LLRILAVGEA RKAAPKKEAA PKEEAAPKAE
AKAAAPAKEA APKKEAAPKK AAAPKAEAAE KKPAARKAAP KKDA
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