| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2030 |
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| Symbol | mnmA |
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| ID | 4079928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2141597 |
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| End bp | 2142745 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010406 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_617074 |
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| Protein GI | 103487513 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0713753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGA CCATGATCGC GACCTTGTCC TCTCCCGTCG GGCTTGCCCA GGCCGACTTC
CAGCTCGCCG GACCGATGAA GGACCGGCGA ATCGTCGTCG CGATGTCGGG TGGCGTCGAC
TCGAGCGTTG TCGCGGCACT CGCCGCACGG TCGGGGGCCG AAGTAATCGG CGTGACGCTC
CAGCTCTACG ATCACGGCGC CAAGGCGAAG CGCGTCGGCG CCTGCTGTGC GGGGCAGGAT
ATTCGCGACG CGCGGGCGGT CGCCGACCGG CTCGGCTTCG TGCATCACGT CCACGACCAT
GAAAGCCGCT TTCGCGACAC GGTGATCGAC CAGTTCGCCG ACGAATATCT CGCCGGCCGG
ACGCCGATCC CGTGCGTGCG CTGCAACATG GGGGTGAAGT TCACCGACCT GTTCCAGCTC
GCAAGGGAAC TCGGCGCCGA CTGCCTTGCG ACCGGCCATT ATGTAAGGCG CGTGATGGGG
CCCGATGGCG CGGAAATGCA CCGCGCTGTC GATCCGGCAC GGGACCAGAG CTATTTCCTC
TTCGCGACGA CGCAGGAGCA GCTCGATTTC CTTCGTTTTC CGCTGGGCGG GCTGGAGAAG
AATGTCGTGC GCGAGATCGC ACGCGACCTG GGCCTCGGCG TTGCGGGCAA GCCCGACAGC
CAGGACATCT GTTTCGTCCC CGACGGCGAT TATGCTTCGC TCGTTCGCAA GCTGCGCCCC
GAAGCCGAGG ATCAGGGTGA CATCGTCCAT GTCGACGGCA CCGTGCTCGG CGCGCACAAG
GGCCTTATTC ATTACACCGT CGGCCAGCGG CGCGGGATCG ACATCGGCGG GCAGGCCGAA
CCGCTCTATG TCGTGCGCCT CAATGCCGCG ACGAAGCAGG TGATCGTCGG TCCGCGGCGC
GCGCTGGCCG TGTCGGGCGC GCGACTCGGC GACGCAAACT GGCTCGCGGA CGTCGAAGGC
CGCGATGTGT TGGCGAAAGT GCGCAGCATG GCAAAACCCG TTCCTGCGCG CGTGACGGCC
AACCGGCTGC GCTTTCTGAG CCCCGAATAT GGTGTCGCGC CGGGTCAGGC AGCGGTGCTT
TATGACGCCG CCGACAAGTC TCGCGTCCTC GGCGGCGGAT GGATCGAAGA AACATTCACC
GCGGAATAG
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| Protein sequence | MAPTMIATLS SPVGLAQADF QLAGPMKDRR IVVAMSGGVD SSVVAALAAR SGAEVIGVTL
QLYDHGAKAK RVGACCAGQD IRDARAVADR LGFVHHVHDH ESRFRDTVID QFADEYLAGR
TPIPCVRCNM GVKFTDLFQL ARELGADCLA TGHYVRRVMG PDGAEMHRAV DPARDQSYFL
FATTQEQLDF LRFPLGGLEK NVVREIARDL GLGVAGKPDS QDICFVPDGD YASLVRKLRP
EAEDQGDIVH VDGTVLGAHK GLIHYTVGQR RGIDIGGQAE PLYVVRLNAA TKQVIVGPRR
ALAVSGARLG DANWLADVEG RDVLAKVRSM AKPVPARVTA NRLRFLSPEY GVAPGQAAVL
YDAADKSRVL GGGWIEETFT AE
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