Gene Sala_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2009 
Symbol 
ID4079946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2119380 
End bp2120405 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content64% 
IMG OID638010385 
Productadenosine deaminase 
Protein accessionYP_617053 
Protein GI103487492 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0350723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0124667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACG GCTTCGCCTC GCACGAAGAG CGCGCCGCCT TCATCGCCGG TCTGCCGAAG 
GCCGAACTGC ACCTCCATAT CGAAGGCTCG CTCGAACCCG AACTGCTGTT CGAGTTCGCC
CGGCGCAACC GTGTCGCCAT CCCCTTCGCC AGCATCGACG ACGTGCGCGC CGCCTACGCC
TTCACAAACC TCCAGGATTT CCTCGATATT TATTATCAGG GCATGGGCGT CCTCCACACC
GAGCAGGACT TCTTCGACCT GACCGCCGCC TATTGTGCCC GTGCGAACGC CGACAGCGTC
CGTCACATCG AAATCTTCTT CGATCCGCAA GGCCACACGG CGCGCGGCGT CGCCTTTGAA
ACCGTCATCA CCGGCATCAC CCGCGCGCTG GATGATGCCG AGGCGCGGTA CGGGATCACG
TCAAAGCTCA TCCTCTGCTT CCTGCGCCAC CTCAGCGAAG CCGAGGCCGA AGCGACACTC
GACGAAGCGC TGCCCTTCTT GGGTCGCATT GCCGGCGTCG GCCTCGATTC ATCCGAAGTC
GGCCATCCGC CGGCCAAGTT CGAGCGCGTG TTCGCCCGCG CCCGCAGCCT CGGCCTCAAA
ACCGTTGCCC ATGCGGGCGA GGAAGGTCCA CCCGAATATG TCCGCGAAGC GCTCGACCTC
TTGAAAGTCG ACCGCATCGA CCATGGCAAT CGCAGCCTCG AAGACCCCGC GCTCGTCGCG
CGCCTCGCCG CGTCGGACAT GACGCTCACC GTCTGTCCGC TCTCCAACCT CAAGCTGTGC
GTCGTGGACG ACATCGCCGA TCACCCGCTG AAAATCATGC TCGATGCGGA CCTCAAGGCT
ACCGTCAACA GCGACGATCC CAGCTATTTC GGCGGCTATG TGAACGCCAA TTACCAGGCC
GTCGCCGACG CGCTCGACCT GTCGCGCGAC GACCTCGTCA CCCTCGCGCG CAACAGCTTC
ACCGGCTCCT TCCTGAGTGA TGCGGAAAAG GCGCGCCACC TCGCGGCGAT CGACGCCTAC
GCCTGA
 
Protein sequence
MPDGFASHEE RAAFIAGLPK AELHLHIEGS LEPELLFEFA RRNRVAIPFA SIDDVRAAYA 
FTNLQDFLDI YYQGMGVLHT EQDFFDLTAA YCARANADSV RHIEIFFDPQ GHTARGVAFE
TVITGITRAL DDAEARYGIT SKLILCFLRH LSEAEAEATL DEALPFLGRI AGVGLDSSEV
GHPPAKFERV FARARSLGLK TVAHAGEEGP PEYVREALDL LKVDRIDHGN RSLEDPALVA
RLAASDMTLT VCPLSNLKLC VVDDIADHPL KIMLDADLKA TVNSDDPSYF GGYVNANYQA
VADALDLSRD DLVTLARNSF TGSFLSDAEK ARHLAAIDAY A