| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1984 |
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| Symbol | |
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| ID | 4081028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2092258 |
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| End bp | 2093478 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010360 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_617028 |
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| Protein GI | 103487467 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.309579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTATC ACGCCTTTGA CATGCAGAAG AACTGGCTGG CAGGCGCCAG CGCGCTGGCG
ACCGCGGGCG CGCAGGTGAT GCAGCACCCC GCGAATCCAC TCGGCTATTT CAGCGGCAGC
CCGATGTTTG CCTCGGCGCT CGAGGTCTTT GCCCACGCCG CTGCGCCGCG CGGCAAGCCG
GGGTTCGAGC TGTACGAAAC GACCGTCGAT GGCGAGACGG TGCGCGTGAC CGAGGCGATC
GAGGCGCGGA GGCCCTTTGG CCAGCTCAAG CATTTCAAGC ACAAGGGCGC GAAAGATGCG
CCCAGGCTGC TGATCGTCGC ACCGATGTCG GGCCATTATG CGACGCTGCT GCGCGGGACG
GTCGAACGGA TGCTGCCCGG CCACGACGTG TGGATCACCG ACTGGCGCGA TGCGCGCAAC
GTGCCGCTGG AAGCGGGCCG GTTCGACCTC GACGATTATA TCGACTATCT GATCGCCTGG
CTGGAGCATA TCGGGCCGGG CGCGCACATG CTTGCGGTGT GCCAGCCATC GGTGCCGAGC
CTGGCCGCCG CGGCGATCAT GGCGGCGAAC AGGCATCAAT GCCGTCCGAA GACGCTGACG
ATGATGGGAG GGCCGATCGA CACGCGCAAG GCGCCGACCG CGGTGAACGA ACATGCGACC
ACGCGCCCCT ATGCCTGGTT CCAGGAAAAT GTCATCGCGA CCGTTCCGGC CTATTATCCG
GGAGCGGGGC GGTGCGTCTA TCCGGGCTTC CTGCAGCTTG CCGGTTTCAT GTCGATGAAC
CTTGGCAACC ATATGATGAG CCATTGGGAG ATGTTCAAAC ATCTGGTCGA TGGCGACGGC
GAAAGCGCCG ACAAGACCAA GGAATTCTAT GACGAGTATC GCGCGGTGTG CGACATGACC
GCCGAATTTT ATTTGCAGAC GGTCGATGCC GTGTTCCAGC GCCACCTGCT GCCCAGGGGC
GCGTTCGAGC ACCGCGGCGA GCTGGTGGAC ATCGCAGCGA TCGAGGATAT TGCGATCCTG
GCGATCGAGG GCGAGCGCGA CGATATTTCG GGGATCGGCC AGACCAAGGC GGCGCTGACG
CTGGCCAGGG CACTGCCTGC GGAACGGAAG AAATATCTGC TGGCCAGGGG AGTGGGCCAT
TATGGCATTT TCAACGGCCG CAAGTGGCGC GAGGAGATTG CGCCGGTGGT CGAGCAATGG
ATCCGCGCGC ACGGCGGCTG A
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| Protein sequence | MLYHAFDMQK NWLAGASALA TAGAQVMQHP ANPLGYFSGS PMFASALEVF AHAAAPRGKP
GFELYETTVD GETVRVTEAI EARRPFGQLK HFKHKGAKDA PRLLIVAPMS GHYATLLRGT
VERMLPGHDV WITDWRDARN VPLEAGRFDL DDYIDYLIAW LEHIGPGAHM LAVCQPSVPS
LAAAAIMAAN RHQCRPKTLT MMGGPIDTRK APTAVNEHAT TRPYAWFQEN VIATVPAYYP
GAGRCVYPGF LQLAGFMSMN LGNHMMSHWE MFKHLVDGDG ESADKTKEFY DEYRAVCDMT
AEFYLQTVDA VFQRHLLPRG AFEHRGELVD IAAIEDIAIL AIEGERDDIS GIGQTKAALT
LARALPAERK KYLLARGVGH YGIFNGRKWR EEIAPVVEQW IRAHGG
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