| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1978 |
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| Symbol | |
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| ID | 4081022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2085053 |
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| End bp | 2087212 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010354 |
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| Product | prolyl oligopeptidase |
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| Protein accession | YP_617022 |
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| Protein GI | 103487461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.370537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA AACGCCTGTC CGCGCCGCTC GCGCTGGTCG CCCTTGCCTT GACCCCCACC
GCAGCACAGG CGGCCGCGGC CGCGGCCGCA TCGGCGCCCG CCGCCGCGCT CGCCTATCCC
GACACGGCGC GCGGCGATAC GGTCGATCCG CAGTTCGGCG TCGACGTCGC CGACCCCTAT
CGCTGGCTGG AGGACGACGT CCGCGTCAAT CCGGAGGTTG CGGCGTGGGT CGAAGCGCAG
AACAGGGTGA CCGACGCCTA TCTCGACACG CTGCCCGGTC GCGACGCCTT CCGGGCGCGG
ATGACTGAGC TGTACGATTA TGAACGCTTC GGCCTGCCGA CCAAGGCGGG CGCGCGCTAT
TTCTACACGC GCAACGACGG GCTCCAGCCG CAGTCGGTGC TCTATGTCCG CGAAGGGTTG
AAAGGCGAGG GCCGCGTGCT CATCGACCCC AATCTGTGGG CCAGGGACGG TGCGACCGCG
CTCGCCGAAT GGGAACCGTC GGAGGATGGC AAATATCTTC TCTATGCGGT GCAGGACGGC
GGCACCGACT GGCGCATCGT GCGCGTCAAG GATGTCGCGA CGGGGCAGGA CCTGCCCGAC
GAGGTGCGCT GGGTGAAGTT TTCGGCGCTC GACTGGGCAA AGGACGGCAG CGGCTTTTAC
TATTCGCGCT TCCCGGAGCC AAAGGAGGGC GAAGCCTTCC AGTCGCTCAA CGAAAATCAC
GCCGTCTATT TCCACCGCCT CGGCACGCCG CAAAGCGCCG ATGTGCTGAT CCACGCGACG
CCCGACAAGC CCAAGCTCAA CAACAGCGCA CTCGTCACCG ACGATGGCGA CTATCTGCTT
GTCGTCTCGT CCGAAGGGAC CGACGAACGC TATGGCCTGA CGCTGCATCC GCTCGGCAGG
CCGGGGGCGA AGCCGATCGT CCTTGTCGAC GATTATGCGA ACAACTGGGA ATATGTGACC
AACGCGGGAA CGCGCTTCAC TTTCCTCACC AACAAGGGCG CGCCGCGCGG CCGCCTCGTT
TCGTTCGACA TCCGCAAGCC GGACAAACTC ACCGAACTCG TCGCCGAAAA CCCCGCCACG
CTCGTCGGCG CCTCGCGCGT CGGCGACCGC ATCATCCTCT CCTATCTTGG CGACGCCAAG
TCGGAAGCGC GCATGGTCGC ACTGAACGGC GAGCCGATCG CGAACATCAA CCTCGCCGAC
ATCGGCGCGG CGTCGGGGTT CGGCGGCAAG TCGAGCGACC CCGAAACCTT CTATGCCTTT
TCCAGCTTTG CGCGGCCGAC GACCATCTAT CGCTTCGACA CCGAAACCGG AAATAGCGAG
ATTTTCGCCG AACCCAGGCT GACCTTCAAC CCTGCCGATT TCAGCGTCGA GCAACGCTTC
TATAAATCAA AGGACGGCAC CGAAGTGCCG ATGTTCCTCG TGATGAAAAA GGGCCTCGAC
CGCAGCAAGG GCTCGCCGAC GCTGCTTTAC GGCTATGGCG GCTTCAACGT CTCGCTGACC
CCAGGCTTTT CGCCGACGCG GCTCGCGTGG GTCGACAAGG GCGGCGTGCT CGCGATCGCG
AACCTGCGGG GCGGCGGCGA ATATGGCAAG GCGTGGCACG ACGCCGGCCG CCTTGCGAAC
AAGCAGAATG TCTTCGACGA TTTCATCGCC GCGGGCGAAT ATCTGATCGC CGAGGGCATC
ACCGGCAAGG GTCAGCTTGC GATCGAGGGC GGATCGAACG GCGGCCTGCT CGTCGGCGCC
GTCACCAACC AGCGCCCCGA CCTGTTCGCC GCGGCGCTGC CTGCGGTCGG CGTGATGGAC
ATGCTGCGCT TCGACCGCTT CACTGCGGGT CGTTACTGGG TCGACGATTA TGGCTATCCG
TCGAAGGAGG CCGATTTCCG GAACCTGCTC AGCTATTCGC CCTACCACAA TATCCGCAGC
GGCGTGGCCT ATCCGGCGGT GCTGGTGACG ACCGCCGACA CCGACGACCG CGTCGTGCCG
GGGCACAGTT TCAAATATAC CGCCGCGCTC CAGCACGCGA AGGCGGGCAG CAAGCCGCAC
CTCATCCGCA TCGAAACGCG CGCGGGCCAT GGCAGCGGCA AGCCGACCGA CAAGATCATC
GCCGAGGCCG CCGACAAATA TGCCTTTGCG GCGAAATGGA CCGGGCTGGA CGTCGAATAG
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| Protein sequence | MPAKRLSAPL ALVALALTPT AAQAAAAAAA SAPAAALAYP DTARGDTVDP QFGVDVADPY
RWLEDDVRVN PEVAAWVEAQ NRVTDAYLDT LPGRDAFRAR MTELYDYERF GLPTKAGARY
FYTRNDGLQP QSVLYVREGL KGEGRVLIDP NLWARDGATA LAEWEPSEDG KYLLYAVQDG
GTDWRIVRVK DVATGQDLPD EVRWVKFSAL DWAKDGSGFY YSRFPEPKEG EAFQSLNENH
AVYFHRLGTP QSADVLIHAT PDKPKLNNSA LVTDDGDYLL VVSSEGTDER YGLTLHPLGR
PGAKPIVLVD DYANNWEYVT NAGTRFTFLT NKGAPRGRLV SFDIRKPDKL TELVAENPAT
LVGASRVGDR IILSYLGDAK SEARMVALNG EPIANINLAD IGAASGFGGK SSDPETFYAF
SSFARPTTIY RFDTETGNSE IFAEPRLTFN PADFSVEQRF YKSKDGTEVP MFLVMKKGLD
RSKGSPTLLY GYGGFNVSLT PGFSPTRLAW VDKGGVLAIA NLRGGGEYGK AWHDAGRLAN
KQNVFDDFIA AGEYLIAEGI TGKGQLAIEG GSNGGLLVGA VTNQRPDLFA AALPAVGVMD
MLRFDRFTAG RYWVDDYGYP SKEADFRNLL SYSPYHNIRS GVAYPAVLVT TADTDDRVVP
GHSFKYTAAL QHAKAGSKPH LIRIETRAGH GSGKPTDKII AEAADKYAFA AKWTGLDVE
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