| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1976 |
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| Symbol | |
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| ID | 4081020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2083542 |
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| End bp | 2084531 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638010352 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_617020 |
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| Protein GI | 103487459 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.49704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCC AACTGAAAAG CGCGCGCGTC GAACGCTGGC CCGTCGCGGG CTCGTTCGTC
ATCAGTCGCG GCGCCAGGAA TCATGTCGAT GTCGTTGTCG CGGAGATCGA GGACAGCGGC
GCGATCGGGC GCGGCGAGGG GACGCCGGTT TATTATCTGG GCGAGGATGC GGCCACGTGC
CGCGACCAGA TCCTGCTCGC CGCGGCGCAC GTCGCCGACA TGGCCGCGGC CGAGGCGCGC
GCGGCGGTGC AGGAGATCAT GGCGCCGGGA GCGGCGCGCA ATGCGCTCGA TTGCGCGCTC
TGGGATCTGG AGGCGCGACA GCGTGGCCTG AGGCTCTGGC AGCTTGCGGG CTGCGACGGC
GCGCCGACCG CACGGACGAC CGCCTTCACC ATCTCGCTCG GCAGTCCGGG CGCGATGGCC
GAACAGGCGG CGACGGCGGC GGCCGACGGC TATCATCTGC TCAAGATCAA GCTGACGGGC
GAAGGCGACC GGCTGCGCGT CGCCGGCGTG CGCAAGGGCG CTCCCCACGC CCGGCTGATC
GTCGACGCCA ATGAAAGCTG GGCGCAGGTC GACATATTGG AAGAGGCCGA GGCACTGGCC
GACATGGGCG TTGAAATGAT CGAACAGCCG GTGCCGGTCG GCGCCGACGC GCTGCTCGAT
CCCGTTTATG CGTCGATTCC CTTCGTCGCC GACGAAAGCT GCCAGACGGC GGCCGACGTT
GCGCGCATCG GCGCCTTTTA CGACGGGGTG AACATCAAGC TCGACAAGGC GGGCGGGCTG
ACCGAGGCGC TGCGCATCGC CGACGCGGCC GACGCTGCGG GGCTGGCGAT CATGGTCGGC
TGCATGCTCT CGACCAGCCT TGCGATCGCG CCCGCTTTCG TGCTCGCCCA GCGCGCGCGC
TGGGTCGATT TGGACGGCCC GGCTTTGCTC GAACGCGACC GCGAGGGCGG GTTCGAATTT
CGCGAAGGCC GCATCGGCAC GCCGCGCTAG
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| Protein sequence | MAIQLKSARV ERWPVAGSFV ISRGARNHVD VVVAEIEDSG AIGRGEGTPV YYLGEDAATC
RDQILLAAAH VADMAAAEAR AAVQEIMAPG AARNALDCAL WDLEARQRGL RLWQLAGCDG
APTARTTAFT ISLGSPGAMA EQAATAAADG YHLLKIKLTG EGDRLRVAGV RKGAPHARLI
VDANESWAQV DILEEAEALA DMGVEMIEQP VPVGADALLD PVYASIPFVA DESCQTAADV
ARIGAFYDGV NIKLDKAGGL TEALRIADAA DAAGLAIMVG CMLSTSLAIA PAFVLAQRAR
WVDLDGPALL ERDREGGFEF REGRIGTPR
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