Gene Sala_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1969 
Symbol 
ID4081013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2077550 
End bp2078377 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID638010346 
ProductNUDIX hydrolase 
Protein accessionYP_617014 
Protein GI103487453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTGG CGCGGTTATC GCCTTGGGCC ATGAGCGATG CCGTTTTGCC GTCCGCGCCC 
GAGGCGATGC TGCCCGACGG CGCTATTCCC GCCGCGACGC TGGTTATCAT GCGACCGTCC
GAAGGCGGCG GCCCCGACGA GATTTTGATG GTCAAGCGAT CGGCGAACAT GGCTTTCGCG
GCGGGGGCGG TCGTATTTCC CGGTGGCCGT GTCGATCCCG ACGACCATGA GGTCGCGCGC
CGCCACGGAG CAGGCATCGA TCCGGCAGAC GGCGCCGCGC GCGTTGCGGC GCTCCGCGAG
ACGCTGGAGG AAACGGGGCT CGCGGTCGGC TGGCCCGGCC TTGCCGAAAC GGAGGTCGCC
GAGGTGCGCC GCGCCCTGCT CGGCGGGACG TTGCTGTCCG ACATACTGGC GGCGCGCGAT
GAGCGAATCG CATTGGAATC GCTCGTTCCT TTCGCGCGCT GGTGCCCCAA TTTCAAGGAA
GCACGCACCT TCGACACGCG CTTCTATGCC GTCGCCGCCC CGCCGCACAG CCACGAACTC
ACCGTCGAGG AGGCCGAACA CAGCCATATT TTCTGGGCGA GCGCCGCGGC GACGCTGGCG
ATGGCCGACC GCGGCGAGGT GTCGGTCATC TTCCCGACGC GCCGCAATCT CGAACGGCTG
GCGCAGGCGC CCGACTTCCC GAGCTTTTCG GCGCATTCAT GTGCATATCC GGTCGAACTG
ATCACGCCGT GGATCGAGGA TCGCGATGGT CGGTCCCATC TGTGCATTCC CGATCATCTG
GGCTATCCGG TGACCAGCGA GGCCTTTGAG CGGGTGCGGC GTGGGTGA
 
Protein sequence
MGVARLSPWA MSDAVLPSAP EAMLPDGAIP AATLVIMRPS EGGGPDEILM VKRSANMAFA 
AGAVVFPGGR VDPDDHEVAR RHGAGIDPAD GAARVAALRE TLEETGLAVG WPGLAETEVA
EVRRALLGGT LLSDILAARD ERIALESLVP FARWCPNFKE ARTFDTRFYA VAAPPHSHEL
TVEEAEHSHI FWASAAATLA MADRGEVSVI FPTRRNLERL AQAPDFPSFS AHSCAYPVEL
ITPWIEDRDG RSHLCIPDHL GYPVTSEAFE RVRRG