Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1969 |
Symbol | |
ID | 4081013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2077550 |
End bp | 2078377 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010346 |
Product | NUDIX hydrolase |
Protein accession | YP_617014 |
Protein GI | 103487453 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGCGTGG CGCGGTTATC GCCTTGGGCC ATGAGCGATG CCGTTTTGCC GTCCGCGCCC GAGGCGATGC TGCCCGACGG CGCTATTCCC GCCGCGACGC TGGTTATCAT GCGACCGTCC GAAGGCGGCG GCCCCGACGA GATTTTGATG GTCAAGCGAT CGGCGAACAT GGCTTTCGCG GCGGGGGCGG TCGTATTTCC CGGTGGCCGT GTCGATCCCG ACGACCATGA GGTCGCGCGC CGCCACGGAG CAGGCATCGA TCCGGCAGAC GGCGCCGCGC GCGTTGCGGC GCTCCGCGAG ACGCTGGAGG AAACGGGGCT CGCGGTCGGC TGGCCCGGCC TTGCCGAAAC GGAGGTCGCC GAGGTGCGCC GCGCCCTGCT CGGCGGGACG TTGCTGTCCG ACATACTGGC GGCGCGCGAT GAGCGAATCG CATTGGAATC GCTCGTTCCT TTCGCGCGCT GGTGCCCCAA TTTCAAGGAA GCACGCACCT TCGACACGCG CTTCTATGCC GTCGCCGCCC CGCCGCACAG CCACGAACTC ACCGTCGAGG AGGCCGAACA CAGCCATATT TTCTGGGCGA GCGCCGCGGC GACGCTGGCG ATGGCCGACC GCGGCGAGGT GTCGGTCATC TTCCCGACGC GCCGCAATCT CGAACGGCTG GCGCAGGCGC CCGACTTCCC GAGCTTTTCG GCGCATTCAT GTGCATATCC GGTCGAACTG ATCACGCCGT GGATCGAGGA TCGCGATGGT CGGTCCCATC TGTGCATTCC CGATCATCTG GGCTATCCGG TGACCAGCGA GGCCTTTGAG CGGGTGCGGC GTGGGTGA
|
Protein sequence | MGVARLSPWA MSDAVLPSAP EAMLPDGAIP AATLVIMRPS EGGGPDEILM VKRSANMAFA AGAVVFPGGR VDPDDHEVAR RHGAGIDPAD GAARVAALRE TLEETGLAVG WPGLAETEVA EVRRALLGGT LLSDILAARD ERIALESLVP FARWCPNFKE ARTFDTRFYA VAAPPHSHEL TVEEAEHSHI FWASAAATLA MADRGEVSVI FPTRRNLERL AQAPDFPSFS AHSCAYPVEL ITPWIEDRDG RSHLCIPDHL GYPVTSEAFE RVRRG
|
| |