Gene Sala_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1967 
Symbol 
ID4081011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2075920 
End bp2076780 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID638010344 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_617012 
Protein GI103487451 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC CCGATGACGA CCCGCTCGCT GCGCTTGTCC AGATGACCAG CGGGATTGAC 
CCGGCCGCCA ATCTGGCGGT GATCGACCGC GCGATGGGCG AAGCGGCGGC GCATGGCGCG
GCGATGGCCT TTCTACCCGA AATGTCGTTG TTGCTCGACC GCGATCGCGC GCGTTCGGCG
GCGCATATCG CAACCGAAGC ACAAAGCCCG TGGCCGTCGG CGTTGCAGGA GATGGCGCGG
CGGCATGCCA TATGGCTGCA TTCGGGGTCG ATGCCGCTGC TCGCCGACGA TGGCCAACGG
CGCGTCAACC GCAGCCATGT CATCGCCGCC GATGGCAGAA TCCGCGCGCG GTACGACAAG
ATCCACATGT TCGACGTGCA GCTGCCATCG GGCGAGAATT GGCAGGAATC GGCGGCTTAT
GCGGGGGGCG ACGCGCTCTG CATCGTCGAT ACGCCGCTCG GCCGGCTGGG CCTTAGCATC
TGTTACGACC TGCGCTTTCC CGAACTCTAT CGCGCGCTTG TCGACAGCGG CGCGACGCTG
ATCGCGATCC CCGCCGCCTT CACCGTGCCG ACGGGCGAGG CGCATTGGCA CGTCCTGCTC
CGCGCGCGTG CGATCGAAAC CGCATGCCAT GTCGTTGCCG CGGCGCAATG CGGCCAGCAC
ACCGACGGCC GCACAACCTA TGGACACAGC CTGGCGGTCG ATCCGTGGGG TGCGATCCTC
GCCGATGCCG CGCGGAGCGA TGAAGCGAAT CAGAAGGGTT ATTCGCTGAC GATCGTGCCG
ATCGACGCGA CCGCGGCAAC CAGGGCGCGC GCGGCAATTC CGCTGAGCCG GTCGCGCGCG
ATTCGCCGCA TCGACCTTTA G
 
Protein sequence
MTGPDDDPLA ALVQMTSGID PAANLAVIDR AMGEAAAHGA AMAFLPEMSL LLDRDRARSA 
AHIATEAQSP WPSALQEMAR RHAIWLHSGS MPLLADDGQR RVNRSHVIAA DGRIRARYDK
IHMFDVQLPS GENWQESAAY AGGDALCIVD TPLGRLGLSI CYDLRFPELY RALVDSGATL
IAIPAAFTVP TGEAHWHVLL RARAIETACH VVAAAQCGQH TDGRTTYGHS LAVDPWGAIL
ADAARSDEAN QKGYSLTIVP IDATAATRAR AAIPLSRSRA IRRIDL