| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1966 |
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| Symbol | |
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| ID | 4080515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2072900 |
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| End bp | 2075836 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010343 |
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| Product | peptidase M16-like protein |
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| Protein accession | YP_617011 |
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| Protein GI | 103487450 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG ATCCAGCGCG CGCGCCCCTT CGTTTTGCCC GTTCCATGCT TGTCGGCGCC
CTCGCCGCAC TGCTGCTGGC GCCGCTCGCC GCGCGCGCCC AGCACGAGGT CGCGACCGCG
AAGCAAGCGG GGAACAGCGA CTGGCTTTAT GTTGGCAGTG ACATTCCACG CGATACGGCG
TGGCAGTTCG GCATCCTCCC CAATGGCCTG CGCTATGCCG TGCGCAATAA CGGCGTGCCG
CCGGGGCAGG TGTCGATCCG CGTGCGGATG GATGTCGGTT CGATGTTCGA GACCGACGAT
GAGCGAGGCT ACGCCCATCT GCTCGAACAT CTGACCTTTC GCGGCTCGGA GCACATCCCC
GATGGCGAGG CAAAACGTAT CTGGCAGCGC TTCGGCGTAA CCTTCGGCAG CGATTCGAAC
GCCCAGACGA CGCCGACGCA GACCGTCTAC CAGCTCGACC TTCCCAGCGT GACGCCCGCG
AATCTTGACG AAAGCATGAA ATTGCTTGCG GGCATGATCC GTGCGCCGCG TATTTCGGAA
CTGGCGGTGG CGGCCGAGCG CGGAGTCGTC ATGGCCGAGC TGCGCGAATC GGACGGACCG
CAGAAACGCA TCGCCGACGC GACCAACGCG CATCTGTTCG CGGGGCAATT GCTTGGCGAT
CGCTCGCCAA TCGGTACAAC GGCCTCGCTG GGCAAGGCGA CCGCGGCGTC CGTCGGCGCC
TTTCACGATC GCTGGTATCG TCCCGAACGC GCGGTGGTCG TCATTGTCGG CGACGGCGAC
CCCGCCACTT TCGCGCGGCT GATCGCCAGA TATTATGGCG ACTGGAAAGG GGAGGGGACC
AATCCGCCCG ATCCCGATTT CGGAAAGCCC GATCCCGCGG CGCCCGCGGC GCTCGAAATT
GTCGAGCCGA ACCAGCCGCT CGCGCTCACG CTCGCCATGG TCCGGCCGTG GAAAAGGCGG
ATCGACACGG TCGAAAATAC GCGGCGGCTT TACCTCGAGT TCATCGCACA GGCGCTCGTC
AACCGGCGGC TCGAAAATCG CGCGCGCGCG GGCGCCAGCT ACCTCGTCGC CACCGTCGAA
CAGCAATATG TCAGTCGCAG CGCCGATGTG ACCGCGGCCT CGATCGTTCC GTTGAGCGAC
TGGAAGGCCG CGCTCGCCGA TGTCCGCGGG GTGATCGCCG ATGCGGTGCG CCGCCCGCCG
TCGCAGGCCG ACATCGACCG CGAGACGAAC GAGATCGAGG CCTTTCTGCT CAAAGAGTTG
GAAAATGCGC GCAACGAGCC CGGCGCGCGG CTTGCGGACG ACATGGTGCG CGCGGTCGAC
ATCAACGAAA CGGTGACGAG CCCGCAGGGG CAGGTCGATA TGTTCAGGGC GATCCGGGCG
TCGGCGACAC CGCAGGTGAT GCTCGACATC AGCCGCGCCA TCTTTTCCGC GCCGGTCACC
CGCGTCGTGC TGACCACACC GACATCGGCC GGCGGGAACG GCGCCGTCCT CGCCGCGCTG
AAGGCTCCCG TCGCCGCGCG CGACGAACGG CTTGCGGCGG TCGAGGCCGA TTTCGGGCAG
CTTCCGTCGC TTGGCAAGCC CGGCTCCATC GTCGCGACGG CGCCGCTGCC GGGCCTTCGC
GCCGAGCGGA TCGAGCTGTC GAACGGCGTC ACCGCGCTGG TGTCGAACAA CAAGATCGAA
CCGGGCAAGG TGCGCGTCAA TGTGCGCTTC GGTACCGGCA ATCGCAGCGT CGCCGCCGAT
GCGCCGAACC TGTTGTGGAC CGGCGACTAT GCGCTTGTCG CGAGTGGAAT CGGACCGTGG
GGCCAGAATG AGATCGACCA GCTCACCAAC GGGCGGCAGA TTCAGATGAA CTTCGCGATC
GACGACGATG CTTTCGAGCT GTCCGCCGAA AGCCGCCCTG CCGACCTTGC CGACCAGTTG
CGGCTCATGG CGGCCAAGCT GGCGCTGCCG CGCTGGGATG CGGCGCCGGT CGAGCGGCTG
CGGATCGGCT ATCTCACCGG CTATGAGCTC AATGACGCGA CCCCCAATGC GGTACTCGAA
CGCCATTTGC GCGGCTGGCT GACCGGCAAT GACGCGCGCT GGGCGGCGCC CGACCGCGCG
GCAATCGAGG CGCTGACGCC TGCGGCCTTC CGGGCCTTCT GGGAACCGAG GCTCGCCAGC
GGACCCATCG AGGTGCAGAT TTTCGGCGAC CTCGAAACGG TCGATTACCG GAAAATCCTG
ACCGAAAGTT TTGGGGCGCT GGCGCCGCGC GCGATTCTGG CGCCACCGGG TGGCCAGCGC
GTCGATTTTG CGCCGCACGT CACCGTTCCC GAAATCGCCT ATCACCGCGG CGAGCAGGGG
CAGGCGGCGG CGATGACGGC CTGGCCGACC GGCGGCGGCC GCACCAATCC GCGCGACGCG
CGCGCGCTGG AGGTGCTGGC CGCAATCTTC AACGACCGGC TGTTCGATCG GCTACGTGCT
GAACAGGGCG CCAGCTACGG CCCCGTCGTC GACAGCCACT GGCCAACGGG ATTCGACACC
GGCGGCTATC TGCTCGTCGG CAGTCTGCTC GCGCCAAAGG ACATCGACCG TTTTTACGGG
ATTGCGCGCG ACATCGCCGC CGACCTCGTC GCACGACCGG TCAGCGCCGA CGAATTGGCG
CGCAACGCCG GCCCGATCCG CGAGCAGGTG GCGCGAGCAT CGACAGGCAA TGTCTATTGG
ATGTTCCTGC TCGAAGGCGC GACGCGCGAT CCGCGCGTGA CTGCGGCGGC GCTGTCGATC
CAGGACGACT TGGCGGCCGT CACGGCCGCC GATGTGCAGC GGCTCGCGCG CCAGTATCTG
ACGCCGGACC GCCAATGGTC GCTTGCCATC CTGCCCGAGG GCATGACGCT CGCCGATGCG
TCGGCACTGA ATGGTGCGAT GTCGACCCGT CTCGATGCCG CGGTTGGCGG ACGTTAG
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| Protein sequence | MSSDPARAPL RFARSMLVGA LAALLLAPLA ARAQHEVATA KQAGNSDWLY VGSDIPRDTA
WQFGILPNGL RYAVRNNGVP PGQVSIRVRM DVGSMFETDD ERGYAHLLEH LTFRGSEHIP
DGEAKRIWQR FGVTFGSDSN AQTTPTQTVY QLDLPSVTPA NLDESMKLLA GMIRAPRISE
LAVAAERGVV MAELRESDGP QKRIADATNA HLFAGQLLGD RSPIGTTASL GKATAASVGA
FHDRWYRPER AVVVIVGDGD PATFARLIAR YYGDWKGEGT NPPDPDFGKP DPAAPAALEI
VEPNQPLALT LAMVRPWKRR IDTVENTRRL YLEFIAQALV NRRLENRARA GASYLVATVE
QQYVSRSADV TAASIVPLSD WKAALADVRG VIADAVRRPP SQADIDRETN EIEAFLLKEL
ENARNEPGAR LADDMVRAVD INETVTSPQG QVDMFRAIRA SATPQVMLDI SRAIFSAPVT
RVVLTTPTSA GGNGAVLAAL KAPVAARDER LAAVEADFGQ LPSLGKPGSI VATAPLPGLR
AERIELSNGV TALVSNNKIE PGKVRVNVRF GTGNRSVAAD APNLLWTGDY ALVASGIGPW
GQNEIDQLTN GRQIQMNFAI DDDAFELSAE SRPADLADQL RLMAAKLALP RWDAAPVERL
RIGYLTGYEL NDATPNAVLE RHLRGWLTGN DARWAAPDRA AIEALTPAAF RAFWEPRLAS
GPIEVQIFGD LETVDYRKIL TESFGALAPR AILAPPGGQR VDFAPHVTVP EIAYHRGEQG
QAAAMTAWPT GGGRTNPRDA RALEVLAAIF NDRLFDRLRA EQGASYGPVV DSHWPTGFDT
GGYLLVGSLL APKDIDRFYG IARDIAADLV ARPVSADELA RNAGPIREQV ARASTGNVYW
MFLLEGATRD PRVTAAALSI QDDLAAVTAA DVQRLARQYL TPDRQWSLAI LPEGMTLADA
SALNGAMSTR LDAAVGGR
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