| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1964 |
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| Symbol | |
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| ID | 4080513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2069542 |
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| End bp | 2070756 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638010341 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_617009 |
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| Protein GI | 103487448 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.431704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGA TCAAGGTAGC CAACCCGGTC GTCGAACTCG ACGGCGACGA AATGACCCGG
ATCATCTGGC AATGGATCCG CGAGCGGCTG ATCCTGCCCT ATCTCGACAT CGACCTGCAT
TATTACGACC TCGGCATCGA GGAACGCGAC CGCACCGACG ACAAGATCAC CGTCGAGGCC
GCGAACGCCA TCAAGAAATA TGGCGTCGGC GTCAAATGCG CGACGATCAC CCCCGACGAA
GCCCGCGTCG AGGAGTTCGG CCTCAAGAAG ATGTGGAAGT CGCCGAACGG CACGATCCGC
AACATCCTGG GCGGCGTGGT GTTCCGCGAA CCGATCGTGA TGAAGAATGT GCCGCGGCTG
GTCCCCGGCT GGACCGACCC GATCGTCGTC GGACGTCATG CCTTCGGCGA CCAGTACAAG
GCGACCGATT TTCGCGTCCC CGGCCCCGGC AAGCTGCGCC TGGTGTTCGA GGGCGAGGAC
GGCACGCTGA TCGACGAGGA AGTGTTCCAG TTCCCTTCGT CGGGCGTCGC GATGGGCATG
TACAATCTCG ACGATTCGAT CCGCGACTTC GCGCGCGCCA GCCTGAACTA TGGCCTTGCG
CGCGAATGGC CGGTGTATCT GTCGACCAAG AACACGATCC TGAAAGCCTA TGACGGGCGT
TTCAAGGACA TCTTCGAGGA AGTGTTCAAC GCCGAATTCA AGGTGCAGTT CGACGCGCTC
GGCATCGTCT ACGAACATCG CCTGATCGAC GACATGGTCG CCTCGGCGCT CAAATGGTCG
GGCAAGTTCG TCTGGGCGTG CAAGAATTAC GACGGCGATG TCCAGTCGGA CACCGTTGCG
CAGGGGTTCG GCTCGCTCGG CCTGATGACC AGCGTGCTGA TGACCCCCGA CGGCAAGACC
GTCGAATCCG AAGCCGCGCA CGGCACCGTC ACGCGCCACT ATCGCATGCA CCAGCAGGGC
AAGGCGACCT CGACCAACCC GATTGCCTCG ATCTTTGCCT GGACCGGCGG GCTCAAACAT
CGCGGCAAGC TCGACGACAA TGCCGCGCTG GTGAAGTTCG CCGACGATCT GGAGAAGGTT
TGCGTCGCGA CGGTCGAAAG CGGCAAGATG ACCAAGGATC TGGCGCTGCT CATCGGTCCC
GACCAGAACT GGTTGACGAC CGAAGGCTTT TTCGAGGCGA TCGTCGAGAA TCTCGACAAG
AAGATGGGCG CTTAG
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| Protein sequence | MGKIKVANPV VELDGDEMTR IIWQWIRERL ILPYLDIDLH YYDLGIEERD RTDDKITVEA
ANAIKKYGVG VKCATITPDE ARVEEFGLKK MWKSPNGTIR NILGGVVFRE PIVMKNVPRL
VPGWTDPIVV GRHAFGDQYK ATDFRVPGPG KLRLVFEGED GTLIDEEVFQ FPSSGVAMGM
YNLDDSIRDF ARASLNYGLA REWPVYLSTK NTILKAYDGR FKDIFEEVFN AEFKVQFDAL
GIVYEHRLID DMVASALKWS GKFVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMTPDGKT
VESEAAHGTV TRHYRMHQQG KATSTNPIAS IFAWTGGLKH RGKLDDNAAL VKFADDLEKV
CVATVESGKM TKDLALLIGP DQNWLTTEGF FEAIVENLDK KMGA
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