| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1954 |
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| Symbol | |
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| ID | 4080503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2061228 |
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| End bp | 2062391 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010331 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_616999 |
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| Protein GI | 103487438 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC GTCTCTCCCT CTTCGGCGCC ACGGGATCGG TCGGGCAATC GACGCTCGAC
CTTGTCCGCC GCGACCGCGA GGCGTGGCGC GTCGGGGTGC TGACGGCCAA TTGCGACGTC
CAGGAACTGG CGCGGCTCGC CATCGAGTTC CGGCCCGATG TCGCGGTGGT CGCCGATGAA
AGCTGTTATG GCTATCTCAA GGCCGCGCTC GCGGGGCAGG GGATCGAATG TGCGGCGGGC
GCGGCGGCGC TCGTCGAAGC CGCCGAACGG CGGGCCGATC TCGTCATGGC CGCGATCGTC
GGCACCGCGG GGCTGGCGCC GACGATGACG GCACTGGCGG CGGGGCACGA CGTTGCGCTC
GCCAACAAGG AAGCGCTGGT GTCGGCCGGC GAGCTGATGA CCGCCGCAGC GCGCGCGTCG
GGCGCGACGA TCCTCCCGGT CGACAGCGAA CATAATGCGA TCTTTCAATG CCTCGCGGGC
GGGCGGATCG ACCAGGTGCG GCGCATCATC CTGACCGCGA GCGGCGGCCC GTTCCGCACC
ATGAGCGCCG CCGACATGGC CGCGGTGACC CCGGCGCAGG CGGTCGCGCA TCCCAATTGG
TCGATGGGCG CCAAGATCAG CGTCGATTCG GCAACGATGA TGAACAAGGG CCTCGAACTC
ATCGAGGCGC ATCATCTTTT CCCTGTCGGG CTCGACCGGA TCGAGATCCT CGTCCACCCG
CAATCGGTGA TCCACAGCCT CGTCGAATAT ATCGACTGCT CGACGCTCGC ACAGCTCGGT
TCGCCCGACA TGCGCATCCC GATCGCGTCG GCGCTCGCCT GGCCGCAGCG GATGGCGACG
CCGTGCGCGC CGCTCGACCT GGCGGCGATT TCGCGGCTCG ATTTCGAGGC GCCCGACGAA
GAGCGCTTCC CCGCGACCGC GCTCTGCCGC GCCGCGATCG CGGCGGGCGG CGCGCGCCCG
GCGCAGCTCA ATGCCGCGAA CGAGGTGGCG GTCGCCGCCT TCCTCGCGGG CCGCATTTCC
TTCCCCGCGA TCGTCGATAC GGTACGGCGG GTGGTCGACG CGGCGGAACC TGCGGCTCCG
TCCTCGCTTC AGGACATATT CAGCGTCGAT ACCGCATCGC GGGCGGCTGC GCTGCGCTTT
GTGGAACAAT ATGAACATGC TTGA
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| Protein sequence | MTRRLSLFGA TGSVGQSTLD LVRRDREAWR VGVLTANCDV QELARLAIEF RPDVAVVADE
SCYGYLKAAL AGQGIECAAG AAALVEAAER RADLVMAAIV GTAGLAPTMT ALAAGHDVAL
ANKEALVSAG ELMTAAARAS GATILPVDSE HNAIFQCLAG GRIDQVRRII LTASGGPFRT
MSAADMAAVT PAQAVAHPNW SMGAKISVDS ATMMNKGLEL IEAHHLFPVG LDRIEILVHP
QSVIHSLVEY IDCSTLAQLG SPDMRIPIAS ALAWPQRMAT PCAPLDLAAI SRLDFEAPDE
ERFPATALCR AAIAAGGARP AQLNAANEVA VAAFLAGRIS FPAIVDTVRR VVDAAEPAAP
SSLQDIFSVD TASRAAALRF VEQYEHA
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