| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1946 |
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| Symbol | |
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| ID | 4082895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2050771 |
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| End bp | 2052396 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010323 |
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| Product | major facilitator transporter |
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| Protein accession | YP_616991 |
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| Protein GI | 103487430 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG CAGAGGCAGC GGCACCTATC GTCACCCGCC AGAGCGAACG CAAGGTCATC
CTCGCCTCGT CGCTCGGTAC GGTGTTCGAA TGGTATGATT TCTACCTCTA CGGCCTGCTC
GCGACGGTCA TTTCGGCGCA GTTCTTCTCT GGCGTCAACG AAACCACGGG CTTCATCTTT
GCGCTTGCCG CCTTTGCCGC GGGCTTTGCG GTGCGGCCCT TTGGCGCAGT TGTCTTCGGG
CGCATAGGCG ACCTCGTCGG GCGCAAGAAT ACGTTTCTGG TGACCATGGG GCTGATGGGC
GCCTCGACGT TCCTCGTCGG CCTGCTGCCC AGCTATGCGT CGATCGGGGT CGCGGCGCCG
ATCCTGCTCG TTGTCTTGCG CCTTGTGCAA GGACTCGCGC TTGGCGGCGA ATATGGCGGC
GCTGCCACTT ATGTTGCCGA ACATGCGCCC GAGGGGAAGC GCGGGCTGTT CACCAGCTTC
ATCCAGACCA CCGCGACGCT CGGCCTGTTC GCGGCGCTCG GCGTCGTCAT CGTCATCCGC
TCGGCGATGG GCGAGGCGGC GTTTGCCGAC TGGGGCTGGC GCATCCCCTT CCTCATTTCA
ATCGTCCTGC TCGGCATTTC GCTCTGGATC CGCCTCCAGC TCGAGGAAAG CCCGGTCTTC
AGGCAGATGA AGGCAGAGGG GACGACGTCG AAGGCGCCGT TGACCGAAGC CTTCGGCCGC
TGGGTAAATC TCAAATGGGT GCTCGTTGCG CTGTTCGGCG CCGTCGCGGG GCAGGCGGTC
GTCTGGTACA CGGGGCAATT CTATGCGCTA TTCTTCCTCG AAAAGACGCT GAAGGTCGAT
GGCGCGGCGG CGAACATATT GATCGCCATC GCGCTTGCAC TCGGCACACC CTTTTTCATC
CTCTTCGGCT GGCTCAGCGA CAAGGTGGGG CGCAAACCGA TCATCCTCAC GGGCTGTGCC
CTCGCGGCGC TGACCTATTT CCCGGTGTTC CAGATGCTGA CCGCTGCGGC CAATCCGGCG
CTCGCCGAGG CACAGGCGCG GGCGCCTGTT GTCGTGTTCG CCCATCCCGA GACATGCTCG
TTCCAGTTTG ACCCTATTGG CCGCACCTCG TTCGACCGGA CGGGCTGCGA CATCGCCAAG
TCAGCGCTCG CCAGAGCGGG GATCCCTTAT GCCAATGAGG ATGGACCATA TGATGGTCGC
GCGCTTGTCC GCGTCGGCGA TGAAGACATC CCGGTGATCG ACAAGGCCCA ATTCGGCGCT
GCGCTTACAC CCGCGCTCGC CGCGGCCGGC TATCCACCGA AAGCCGATCC CGCCGCGATC
GACAAGCCGC TCGTCGTCGC GATCCTCTTC TACCTCGTGC TGCTCGTGAC GATGGTTTAT
GGCCCGATCG CCGCTTTGCT CGTGGAGCTG TTTCCCAGCC GCATCCGTTA CACCGCCATG
TCGTTGCCCT ATCATATCGG CAACGGCTGG TTCGGCGGAT TTCTGCCGAC GACGGCGTTC
GCGATGGTCG CCGCGACGGG CAATATCTAT TACGGCCTCT GGTATCCGGT CATCGTCGCG
GTGATCACGC TGGTGGTCGG CCTGTTGTTC CTGCCCGAAA CCTTCCGCCG GTCGATCCAT
CAATAG
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| Protein sequence | MIDAEAAAPI VTRQSERKVI LASSLGTVFE WYDFYLYGLL ATVISAQFFS GVNETTGFIF
ALAAFAAGFA VRPFGAVVFG RIGDLVGRKN TFLVTMGLMG ASTFLVGLLP SYASIGVAAP
ILLVVLRLVQ GLALGGEYGG AATYVAEHAP EGKRGLFTSF IQTTATLGLF AALGVVIVIR
SAMGEAAFAD WGWRIPFLIS IVLLGISLWI RLQLEESPVF RQMKAEGTTS KAPLTEAFGR
WVNLKWVLVA LFGAVAGQAV VWYTGQFYAL FFLEKTLKVD GAAANILIAI ALALGTPFFI
LFGWLSDKVG RKPIILTGCA LAALTYFPVF QMLTAAANPA LAEAQARAPV VVFAHPETCS
FQFDPIGRTS FDRTGCDIAK SALARAGIPY ANEDGPYDGR ALVRVGDEDI PVIDKAQFGA
ALTPALAAAG YPPKADPAAI DKPLVVAILF YLVLLVTMVY GPIAALLVEL FPSRIRYTAM
SLPYHIGNGW FGGFLPTTAF AMVAATGNIY YGLWYPVIVA VITLVVGLLF LPETFRRSIH
Q
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