| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1930 |
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| Symbol | |
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| ID | 4082879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2035614 |
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| End bp | 2037146 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010307 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_616975 |
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| Protein GI | 103487414 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.426512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CCGAAAACCC CGTGTCGCAG CCCATCGACC ATCTCGCCCG CCGCGGCGCG
CCGGATGCGG CTGCGCTGCT GATCGGCGAA CGGGTGGTGA CCTATGCCGA ACTCGACGCG
GGGGTGGGAC TGCTTGCGGC GTGGCTACGC GAACAGGCCG GCGGTCCCGG CGAGCGCGTC
GCGAGCTGGA GTGCGAAGAC CCGGCTCGCC TGTCTGATGC CGCTCGCCGC GGCGCGCGCG
GGGCTGATCC ATGTGCCGAT CAATCCGCTG CTCAAGGGGC CGCAGGCGCA GCATATCCTG
GCCGACAGCG GCGCGAAGCT GCTTCTCGCC AACGCCGCGC GCGCCGAGTC GCTGGGCGAC
GGACGGCCCG CCGGTTGCGC GCTGCACGAT CTCAACATCG CCGAGGAGGC TGTTGATTCG
GGAGGCAAGA CGTTGCCGCC GTCGAAGGCC GATCCCGACG ATCTCGCCGC CATTCTCTAC
ACCAGCGGAT CGACCGGGCG GCCCAAGGGG GTGATGCTCA GCCACGCGAA CCTGTGGCTC
GGCGCCGAAA GCGTCGCGAC CTACCTGAAG CTCATGCCCG TCGACCGCGT GCTCGGCGTA
TTGCCCTTGA GCTTCGACTA TGGGCAGAAT CAGCTGCTGT CGAGCTGGTA TGCCGGCGCC
GCGGTGGCGC CGCTCGATTA TCTGACCGCG CGCGACGTCG TGAAGGCGGT CGCGCGCCAC
GACATCACGA CGCTCGCCGG CGTGCCGCCC CTGTGGGTGC AACTCGTCGA GGCGGACTGG
CCCGCCGACA CCGCGGCCTT GCTCAAGCGC CTCACCAACA GTGGTGGCGC GCTCACCCCT
TCGCTGATCG AGGCGATGCG CCGCACTTTC CCCGCCGCCG ACATCTATCC GATGTACGGG
CTGACCGAGG CGTTTCGTTC GACCTGGCTC GATCCCAAAT TCGTCGCCGA CCATCCGACG
TCGATGGGGC GTGCGATCCC GCACGCCGAA ATCCTTGTCT GCCGCGGCGA CGGCACGATC
ACCGCCGACG AGGAGCCGGG CGAGCTGGTG CATTGTGGCC CGCTCGTCGC CAAGGGCTAT
TGGCGCGACG CGGCGCGCAC CGCCGAGCGA TTCCGCCCCG CGCCGCCCGC GTCGCTTTAT
GGCGGCACCG CGGTCTGGTC GGGCGACAGG GTGCGGCGTG ATGCGAACGG TCTTCTCTAT
TTCGTCGGCC GCGACGATGC GATGATCAAG ACGGCGGGCA ACCGTGTCAG CCCGACCGAG
ATCGAGGAGG CTGCGGTCGC TTCGGGGCTG GTCTATGAAG CGGTGGCGTT CGGGGTCCCC
GATGCGCGGC TCGGCGCGGC GATCATATTG ATCGTGCGCG GCACGCATGG ACCGGCCGAC
GAGGAGGGGC TTGCTGCCTG GCTTCGCCGG AATCTGCCGA ACTTCATGCA GCCGCAGGTC
ATCGAATGGC GCGATGCGCT GCCGCGCAAT CCCAATGGCA AGCTCGACCG GGTGGCGATC
GCCGCCGATT GGACGAGGGT GATGGCGGCA TGA
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| Protein sequence | MTTPENPVSQ PIDHLARRGA PDAAALLIGE RVVTYAELDA GVGLLAAWLR EQAGGPGERV
ASWSAKTRLA CLMPLAAARA GLIHVPINPL LKGPQAQHIL ADSGAKLLLA NAARAESLGD
GRPAGCALHD LNIAEEAVDS GGKTLPPSKA DPDDLAAILY TSGSTGRPKG VMLSHANLWL
GAESVATYLK LMPVDRVLGV LPLSFDYGQN QLLSSWYAGA AVAPLDYLTA RDVVKAVARH
DITTLAGVPP LWVQLVEADW PADTAALLKR LTNSGGALTP SLIEAMRRTF PAADIYPMYG
LTEAFRSTWL DPKFVADHPT SMGRAIPHAE ILVCRGDGTI TADEEPGELV HCGPLVAKGY
WRDAARTAER FRPAPPASLY GGTAVWSGDR VRRDANGLLY FVGRDDAMIK TAGNRVSPTE
IEEAAVASGL VYEAVAFGVP DARLGAAIIL IVRGTHGPAD EEGLAAWLRR NLPNFMQPQV
IEWRDALPRN PNGKLDRVAI AADWTRVMAA
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