| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1929 |
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| Symbol | |
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| ID | 4082878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2034388 |
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| End bp | 2035617 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638010306 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_616974 |
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| Protein GI | 103487413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase
[TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGC ACGGGCCAAT CCCGCCCGGA TTCCGGGCCG ACCCTGACGG GATGCTGCTG
ATCGGCGGCG ACCGTGCCGA ATCGCTGGCC GATGTCGCGG GCGATACGCC GCTCTTCGTC
TATGACAGCG CGATGCTGGC CGCGCGCGCC GCCGAATGGC GCGCGGCGAT GCCCGCCGCT
GTGCAGCTCC ATTATGCGAT GAAGGCCAAT CCCTATCCGC CGCTGCTTGC CTTCATGGCG
GGGCTGGTCG ACGGGTTCGA CGTGGCGTCG GGCGGCGAGT TGAAGGCGGC GCTGGCGAGC
GGGATGGATG CCGCGCACAT CAGCTTCGCC GGGCCGGGCA AGCGCGACCG CGAGCTGGAG
GCGGCGCTTG AAGCAGGCGC GACGCTGAAC CTCGAATCCG CGGGCGAGGC AGAGCGCGCA
TTGGCGATCG CGGCGCACCT GGGCGCGACG CCGCGGCTCG CGGTGCGCGT CAATCCCGAC
TTCGACCTCA AGGGATCGGG GATGAAGATG GGCGGCGGCG CCAAGCCCTT CGGGGTCGAT
GCTGCCGCGG TTCCGGCGCT CGTGCGCCGC CTGATCGATG CGGGCGCCGA CTGGCGGGGT
TTTCATATTT TCGCCGGATC GCAAGCGCTT GACGCGGCCG CCATCGCCGA AATGCAGGCG
CAGACGGTCG CGCTCGCGGC GCGGCTTGCG GACGCGATCG GGACTGCGCC GCCGCTCGTC
AATCTGGGCG GCGGGATGGG GGTGCCCTAT TTCCCCGGTG ATACCGCGGT CGATGCGGCG
GCGGTGGGGG AAGCGCTCGG CGAGACGCTG GCCGCGCGCG ACGCCGCGCT GGCGGACAGC
CGCTTTGCGA TGGAACTGGG TCGCTGGCTC GTGGCCGAGG CGGGGGTTTA TCTGACGCGC
ATCGTCGACC GGAAGGTCAG CCATGGCGAA ACCTTCCTCG TCACCGACGG CGGCCTGCAT
CACCAGTTGG CGGCAAGCGG CAATTTCGGC ACCGTCATCC GTCGCAACTA TCCGATCGCG
GTGGCGAACG CCTTTGGCCG TGAGCCCGTC GAGACCGTTG CGGTCGTTGG CTGCCTGTGC
ACCCCGCTCG ACCGGCTTGG CGATCAGGTC GCACTGCCGC GCGCCGACGT CGGCGATCTG
ATCGCGATCT TCCAGGCCGG GGCCTATGGC GCGAGCGCGA GTCCGGCGGC GTTTCTGGGG
CAGGGGCCGG CGCGCGAGCT GCTGGTATAG
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| Protein sequence | MKPHGPIPPG FRADPDGMLL IGGDRAESLA DVAGDTPLFV YDSAMLAARA AEWRAAMPAA
VQLHYAMKAN PYPPLLAFMA GLVDGFDVAS GGELKAALAS GMDAAHISFA GPGKRDRELE
AALEAGATLN LESAGEAERA LAIAAHLGAT PRLAVRVNPD FDLKGSGMKM GGGAKPFGVD
AAAVPALVRR LIDAGADWRG FHIFAGSQAL DAAAIAEMQA QTVALAARLA DAIGTAPPLV
NLGGGMGVPY FPGDTAVDAA AVGEALGETL AARDAALADS RFAMELGRWL VAEAGVYLTR
IVDRKVSHGE TFLVTDGGLH HQLAASGNFG TVIRRNYPIA VANAFGREPV ETVAVVGCLC
TPLDRLGDQV ALPRADVGDL IAIFQAGAYG ASASPAAFLG QGPARELLV
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