| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1928 |
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| Symbol | |
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| ID | 4082877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2033560 |
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| End bp | 2034216 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010305 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_616973 |
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| Protein GI | 103487412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCT ACCCCTCGCT TCGCGCCCTG CGCGCCGTGC TCGCCTCGGG CATCGCGGTA
ACGGCTTTGA CGGGGTGTAT GGGTGCCGGC GGCAGCGCGC CGCAACTGCC CAGCGCCAAC
TTCGTCCAGA ACCAGGAAGG GCCGGGCGAG GAATATATCA TCGGCCCGCT CGACGAGCTT
CAGATTTTCG TGTGGCGCAA CCCCGAACTT GGCGGCAAGG TACAGGTGCG GCCCGACGGG
CGGATCACCA CGCCGCTGAT CACCGACATG CCCGCGGTGG GCAAGACGCC GACGATGCTG
CAACAGGACA TCAAGCTCCA GCTCAGCCAA TATATCACCG ACCCGATCGT GAGCGTTATC
GTCACCAGCT TCAACAGCAC CTTTTCGCAG CAGGTGCGCA TCGTCGGCGC GACCGAGAAA
CCGGCATCGA TCCCGTTCCG CGCGAACATG ACCGTGCTCG ACGCGATGAT TGCGGTGGGC
GGGCTCGGCG AATATGCGGC GGGCAACAAG GCGCGACTCG TCCGTTACGA CAAGGGGACG
GGCAAGCAGC AGGAGTTCGG GCTGCGGCTG AACGACCTGA TCAAGCGCGG CGATATCAAG
GCGAATGTGC GGTTGCAGCC GGGCGACGTC ATCATCATCC CCGAAAGCAT GTTCTGA
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| Protein sequence | MASYPSLRAL RAVLASGIAV TALTGCMGAG GSAPQLPSAN FVQNQEGPGE EYIIGPLDEL
QIFVWRNPEL GGKVQVRPDG RITTPLITDM PAVGKTPTML QQDIKLQLSQ YITDPIVSVI
VTSFNSTFSQ QVRIVGATEK PASIPFRANM TVLDAMIAVG GLGEYAAGNK ARLVRYDKGT
GKQQEFGLRL NDLIKRGDIK ANVRLQPGDV IIIPESMF
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