| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1927 |
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| Symbol | |
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| ID | 4082784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2031982 |
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| End bp | 2033511 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010304 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_616972 |
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| Protein GI | 103487411 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC TCTACGACGA ACTCCGGGTG GCACTGCACA GCGTCTGGAC GCGCCGGTGG
CTTGTCCTTG CAGTCGCGTG GGGCATCTGC ATCCTCGGCT GGCTGGCGAT CGCGTCGATC
CCCAACCGCT ATGACAGCCG TGCGCGCCTG CTCGTCGACG TCAACGAAAT CCTGCCCGAC
GACGCGCAGA TCGGCGGCGG CCGCGCACAG ATCGACCAGA TCCGCGAGAC GCTGACCAGC
GCGCGCAACA TGGAAAAGGT CGCGGCGACG ACGGGCCTGC TGCCCGCGGG CGCGAGCGAG
CGCGACAAGG CCAACGCGGT GGCGATGCTG CAAAAAAATA TCAAGGTCGT GCCGCAGCAG
GACAATATCT TCGAAATCAC CTCCAGCATC GCCATCGGCA GCCTGTCCGA CGCCGACAAT
GCGAAGCTGG CGTCGGCTGT GCTCGAAAGC CTGATTACCG TGTTCCGCGA CGACCAGCTG
CGCGGCGGCC GGATGAATGC GCGCGAAGGG CTGAAGTTCC TGGACGCGCA GATCGCCGAC
CGCGAAAAGG CGCTGCGCGA GGTCGAGGCG CGGCGCGCGG CGTTCGAGGC GCAGAATATC
GGGCTGGTCC CCGGCGGCGC CGGATCGCCC GCGCAGCGCG TCGAGACGGC GCGCGCGGAA
CTCAGTCAGA TCGATTCGCA GCTTGTCGCC GCGCAGGCGC AACTGGCGGC GGCGAACGGC
CAGCTTGCCT CGACTCCCGC AACCATCCCC GGCGTCGGCG GTGTTGGCGG GAGTGTCGCG
CGACAGCAGC TGGCGGGTGC GCAGAATGAA CTGTCGGCGA TGCGTTCGCG CGGGCTGACC
GACGCGCACC CCGATGTGAT TGCCTTGAAG AGCCAGATCG CCTCGCTGAA GGCGCAGGCC
GACCGCGAAG GATCGGGGGG CGGCGGCGGT GTCCAGAACC CGGCCTATGC GTCGCTCGCC
GCGATGCGCG CCGAACGACA GGCGACGGTG AGCGCGCTGA CGGCACGCAA GAGCCAGTTG
ATGGGCGACA TTGCGCGGAT CACCGCGCAG CAGATCCAGA ACCCCGGCAT CGCCGCCGAA
TATGACCGGA TCAATGGCGA ATATACTGCG TTCAAGGCGC AATATGACAA GCTGCTCGCG
CAGCGCGAAC AGGTGCGGCT GCGCGGCGAA GTGCAGACCG AAACCGACGC GATCCGCATC
GAACTGCTCG ACCCGCCGTC GAAACCGACA AGTCCGGCGG CACCCAACCG GCCGCTGTTC
CTGACGCTGG TGCTGCTCGC GGGCATCGGC GGCGGGGTCG GTGTCGCCTT TGGCCTGTCG
CAGGTGCGGA CAAGCTATGC GACCGCCGCG CGCCTCGAGC GCGCGAGCGG CCTGCCGGTG
ATCGGGTCGA TCACCGAAGT CTTGACGCCG GAGCGCCAGC GCGACCGCCG CAAGAAGCTC
GTCTGGCTGG CAGGGGGAGG AGGCGCGCTC GTCGGGCTTT ATGCGTTGCT GCTGGTCGTA
GAGTTCATCC AGCGCGGCAT GGTTGCGTGA
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| Protein sequence | MNSLYDELRV ALHSVWTRRW LVLAVAWGIC ILGWLAIASI PNRYDSRARL LVDVNEILPD
DAQIGGGRAQ IDQIRETLTS ARNMEKVAAT TGLLPAGASE RDKANAVAML QKNIKVVPQQ
DNIFEITSSI AIGSLSDADN AKLASAVLES LITVFRDDQL RGGRMNAREG LKFLDAQIAD
REKALREVEA RRAAFEAQNI GLVPGGAGSP AQRVETARAE LSQIDSQLVA AQAQLAAANG
QLASTPATIP GVGGVGGSVA RQQLAGAQNE LSAMRSRGLT DAHPDVIALK SQIASLKAQA
DREGSGGGGG VQNPAYASLA AMRAERQATV SALTARKSQL MGDIARITAQ QIQNPGIAAE
YDRINGEYTA FKAQYDKLLA QREQVRLRGE VQTETDAIRI ELLDPPSKPT SPAAPNRPLF
LTLVLLAGIG GGVGVAFGLS QVRTSYATAA RLERASGLPV IGSITEVLTP ERQRDRRKKL
VWLAGGGGAL VGLYALLLVV EFIQRGMVA
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