| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1923 |
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| Symbol | |
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| ID | 4082780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2027096 |
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| End bp | 2027956 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010300 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_616968 |
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| Protein GI | 103487407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.311845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACG GCCTGTCGGT CGATGTCGAG GACTGGTTTC AGGTCGGCGC CTTTGAGCGC
ACGATCGACC GCGCCGACTG GCCGACGCTC GAATGCCGGG TCGAGGCGAA TTGCGACGCG
GTGCTGAAGA TTTTCGCCGA TGCGGGGGTG AAAGGCACAT TTTTCACATT GGGCTGGGTC
GCCGAACGCT ATCCGGCGCT GATCCGCCGC ATCGTCGCGG CGGGGCACGA ACTGGCGAGC
CACGGCTATG ACCACAAGCG CGTGTTCGCG ATGACGGCGG ACGAGTTTGC GGCCGACCTT
CTGAAAACGC GCGCGATCCT TGAAGACATC GGCGGCGTCG CCGTGCGCGG TTATCGCGCG
CCCAGCTTTT CGGTCGACGC ACGCACGCCC TGGGCCCATC CTGTGCTCGC CGAACAGGGC
TATGCCTATT CGTCAAGCGT CGCGCCGGTG GTCCACGACC ATTATGGCTG GCCGCAAAGC
CCGCGCCATG CGTGGCGGCC GGTCACGGGC AGCGACCTCG TCGAATGGCC GGTGACGACC
GCGCGTTTCG CCGGGCGGAC GCTGGCGGCG GGCGGCGGCG GCTTCATGCG AATGCTGCCC
TATGGCTTCA CGCGCTGGGC GATCGCGCAA ATGAATGCCG AGGGGCATCC GGCGATCCTC
TATTTCCATC CGTGGGAGAT CGACCCCGGC CAACCGCGCG TCGCCGATGC GTCGATCCGG
TCGAAGATCC GTCATTACAG CGGCTTGTCG GCCATGGCGG GCAAGCTGAA GAAACTGCTC
GCCGATTTCG ACTGGACGCG CGCCGACGCG CTGCTGCCCG CGCAGCAGCA GCGCGCTGCG
CCTTGGCAGG CCGCGGCGTG A
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| Protein sequence | MQNGLSVDVE DWFQVGAFER TIDRADWPTL ECRVEANCDA VLKIFADAGV KGTFFTLGWV
AERYPALIRR IVAAGHELAS HGYDHKRVFA MTADEFAADL LKTRAILEDI GGVAVRGYRA
PSFSVDARTP WAHPVLAEQG YAYSSSVAPV VHDHYGWPQS PRHAWRPVTG SDLVEWPVTT
ARFAGRTLAA GGGGFMRMLP YGFTRWAIAQ MNAEGHPAIL YFHPWEIDPG QPRVADASIR
SKIRHYSGLS AMAGKLKKLL ADFDWTRADA LLPAQQQRAA PWQAAA
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