| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1903 |
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| Symbol | |
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| ID | 4082609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2001751 |
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| End bp | 2002629 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010279 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_616948 |
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| Protein GI | 103487387 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.180866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG CGCAGCTTCC CCTCAATGCC CTCCGCGCTT TCGAGGCTGC GGCGCGCCAT
CTCAATTTCA CGCGCGCGGG ATTGGAACTC TGCGTCAGCC AGGGGGCGGT GAGCCATCAG
GTCGCCGCGC TCGAGCGCCG CCTTGGCACG CGGCTGTTTC ACCGCCTTCC GCGCGGGCTG
GCCCTGACCG ACGAAGGCCA TGCGCTTGTC CCCGTGGTGT CGGAGGCGTT CGACCGTGTC
GCCGCAACGC TTGACCAATA TGCCGATGGC CGCTTTCGCG AGACACTGAA GGTCGGGGTG
GTCGGCACCT TTGCGACCGG CTGGCTGATG CCACGGCTTG ACGCCTTTTC GCGCGCGCAT
CCGTCGATCG ACCTGCGTAT TGCGACAAAC AACAACCGGG TCGACCTTGC GGGCGAGGGG
CTCGACTATG CGATCCGCTT CGGCGACGGC GCATGGCACG GCACCCACGC CGAACCTTTG
CTTGATGCGC CGATGGCGCC GATCTGCGCG CCGGTGGTCG CGGCGCGGCT CAGGACGCCC
GCCGATCTTG CGTCCGAGCG GCTGCTTCGA TCCTATCGCG CCGACGAATG GGCGCTCTGG
TTCGGTGCGG CGGGCATCGC CGCGCCGGTA ATGCGCGGTC CGGTCTTCGA CAGCTCGGCG
CTGATGGCGG CGGCTGCGGC GGCGGGGCAG GGGGTGGCGC TTGCGCCGCC GTCGATGTTC
ACGCGCGAAC TTGCCGCCGA GTTGCTTGTC CAGCCGTTCG CCATCGCGGT CGACACGGGG
CGCTACTGGC TGACGCGGCT GATGTCGCGC GCCGAGAGTG AGGGGATGCT TCGCTTTCGC
GCATGGCTGT TCGCCGAGGT GGCAGCGGCG GGCGCATGA
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| Protein sequence | MDRAQLPLNA LRAFEAAARH LNFTRAGLEL CVSQGAVSHQ VAALERRLGT RLFHRLPRGL
ALTDEGHALV PVVSEAFDRV AATLDQYADG RFRETLKVGV VGTFATGWLM PRLDAFSRAH
PSIDLRIATN NNRVDLAGEG LDYAIRFGDG AWHGTHAEPL LDAPMAPICA PVVAARLRTP
ADLASERLLR SYRADEWALW FGAAGIAAPV MRGPVFDSSA LMAAAAAAGQ GVALAPPSMF
TRELAAELLV QPFAIAVDTG RYWLTRLMSR AESEGMLRFR AWLFAEVAAA GA
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