Gene Sala_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1890 
Symbol 
ID4082635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1989745 
End bp1990245 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID638010266 
Producthypothetical protein 
Protein accessionYP_616935 
Protein GI103487374 
COG category[S] Function unknown 
COG ID[COG2001] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00242] mraZ protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.999543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0939897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTG TGACGCCCGG CCAATATGCG GGCACCAATT TCGCCGCGAT CGATGGCAAG 
GGGCGCATCG CCGTCCCCTC GCAGTTCCGC AACAATGTGC CCCTCAATGC GGACGGTCAG
CGCGTGCTCT GGGTCGGGTT TCACGAGAAG CTGCCGTGCC TCGTCGCCTA TGGGCAGGAT
CAGTATGACC GGCTGAACGG CGAGATCGAG CGCGACCGCG AAACCGCGCG GCTGCGCAAC
CTCGACTTCG ACGAGGACAG CGAGTTCAAG AAACGCTTCA GCTATACCGA GCCTTATACG
CTCGACGACA GTGGTCGATT CCTGCCCAGC TTCATCCACC GCGACCGCGT CGGCGATGTC
GGCGCGACGG CCTTTGTGGG GTCGGGCCGC CGTCTCGAAA TCTGGTGGCT GCCGACGCTC
GCCGAATGCG CCGAGGCCGA CCCGGTGCTC CAGCGGCTTG CCGCCTCATG GGATGCCGCG
AAAGGGAAGG GGCGAAAGTG A
 
Protein sequence
MAIVTPGQYA GTNFAAIDGK GRIAVPSQFR NNVPLNADGQ RVLWVGFHEK LPCLVAYGQD 
QYDRLNGEIE RDRETARLRN LDFDEDSEFK KRFSYTEPYT LDDSGRFLPS FIHRDRVGDV
GATAFVGSGR RLEIWWLPTL AECAEADPVL QRLAASWDAA KGKGRK