Gene Sala_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1884 
SymbolmraY 
ID4082629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1982608 
End bp1983678 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID638010260 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_616929 
Protein GI103487368 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.442237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.11386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATACT GGCTGGCGGA ATGGCTTGGC TTTCCGGGGG CGCTCAATCT CATCCGCTAC 
CTGAGCTTCC GCTCGGGCGC TGCGGTTGCG ACCGCGATGA TCCTCGGCCT GTGGATCGGT
CCGCGCTTCA TCCTGATGCT GCGGATGCGG CAGGGCAAGG GGCAGCCGAT CCGCGACGAC
GGCCCGCAAA GCCATCTTGC CAAAAAGGGC ACGCCGACGA TGGGCGGGCT GATGATCCTC
ATTTCGCTGA TGATCTCCGC GCTCCTCTGG ATGGACCTCT CCAACCGCTT TGTCTGGGCC
TGTCTGTTCG TCACCGCGGG CTTTGCGGTC GTCGGTTTCC TCGACGATTA TGACAAGGTG
ACCAAATCGA GCCATCGCGG CATTCCGGGG CGGGTGCGGC TGCTTGTCGA GTTCCTCATC
GCCGGGGTCG CGGTGTTGCT GATCGTCTCG CGCACGGGCA CCGACCTCTA TCTGCCCTTT
TTCAGCGGCA TCGTGATTCC GCTCGGCCCC TTTTATTATG TTTTCGCGAT GGTGCTGATC
GTCGGTTTCG GCAATGCCGT GAACCTGACC GACGGGCTCG ACGGGCTCGC GACATTCCCG
GTCATCATCG CCAGCCTGAC CTTCCTTGTC ATCGTCTATC TGTCGGGCAA CGTGAAGTTC
GCCGGCTATC TCGGCATCCC GCATGTCCCC GGCGCGGGCG AGCTGGCCGT ATTTGCCGCG
GCGATCATCG GCGCCTGCCT CGCCTTCCTG TGGTTCAACG CGCCCCCCGC GGCGGTGTTC
ATGGGCGACA CGGGCAGCCT TGCGCTCGGC GGTGCGCTGG CGACGATCGC GGTGACGGCG
CAGCATGAAC TTGTGCTCGT CCTCGTCGGC GGGCTGTTCG TTGTCGAGGC GCTGTCGGTG
ATCATCCAGG TCTTCTGGTA CAAGCGCACC GGCAAGCGCG TGTTTCGCAT GGCGCCGATC
CACCATCATT TCGAGCAGCT CGGCTGGCCC GAATCCACCG TCGTCATTCG CTTCTGGATC
GTCTCGATCG TCCTGGCGCT TGCGGGACTC GCGACCTTGA AGCTGCGGTG A
 
Protein sequence
MLYWLAEWLG FPGALNLIRY LSFRSGAAVA TAMILGLWIG PRFILMLRMR QGKGQPIRDD 
GPQSHLAKKG TPTMGGLMIL ISLMISALLW MDLSNRFVWA CLFVTAGFAV VGFLDDYDKV
TKSSHRGIPG RVRLLVEFLI AGVAVLLIVS RTGTDLYLPF FSGIVIPLGP FYYVFAMVLI
VGFGNAVNLT DGLDGLATFP VIIASLTFLV IVYLSGNVKF AGYLGIPHVP GAGELAVFAA
AIIGACLAFL WFNAPPAAVF MGDTGSLALG GALATIAVTA QHELVLVLVG GLFVVEALSV
IIQVFWYKRT GKRVFRMAPI HHHFEQLGWP ESTVVIRFWI VSIVLALAGL ATLKLR