Gene Sala_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1879 
SymbolmurB 
ID4082624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1976289 
End bp1977188 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID638010255 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_616924 
Protein GI103487363 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.063714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAA CCGCCACCCT GCCGGCCGTT CGCGGCAAGC TCACCCCGCA AGCCCCGCTC 
GCCCCGCTCG TCTGGTTCAA GTCGGGTGGC GCCGCCGACT GGCTGTTCGA GCCGAAGGAC
GTCGACGACC TCGCCGATTT CCTGCGCGAC CTCGATCCGG CGATCCCGGT GATGGCGCTC
GGCCTCGGCT CGAACCTCAT CGTCCGCGAC GGCGGATTTC CCGGCGTCGT CGTCCGGCTG
GGCAAGGCTT TCGCCAAGGT GGAACCGATC GACGCCACCA CATTGCGCTG CGGCGGCGGA
GCGTCGGGCA TTCTCGTTTC CTCGACCGCG CGCGACGCGG GGATTGCGGG GATGGAGTTC
CTGCGTTCGA TTCCCGGCAC CGTCGGCGGC TTCGTGCGCA TGAACGGCGG CGCCTATGGC
GGTGAGGTCA AGGATATATT GGTCGATTGC GACGTCGTGC TGCGCTCGGG CGAACGCAAG
ACGCTCGCAC TTGCCGACCT CGGCTACACC TATCGCCACA GCGAACTGCC CGAGGGCGCG
GTGGTCGTCG GCGCGACCTT TCGTGGCCGG CCCGGCGCAT CGGCGGCGAT CCAGGCCGAG
ATGGACCGCA TCTCGGCGAG CCGCGAGGCC TCGCAGCCGC TGCGTTCGAG AACCGGCGGC
TCGACCTTCA AGAACCCCGC CGGGCACAAG GCCTGGCAAC TGGTCGACGC GGCCGGGTGC
CGCGGGCTGA TGGTCGGCGG CGCGCAGGTC AGCGAGAAAC ACACCAATTT CCTGATCAAT
ACCGGCGATG CGACGAGCGC CGATATCGAG GCATTGGGCG AAGAAGTCCG CCGCCGGGTG
AAGGACAAGA GCGGCATCGA ATTGCAGTGG GAGATTCAGC GCGTGGGTAA GGCCGAATGA
 
Protein sequence
MSATATLPAV RGKLTPQAPL APLVWFKSGG AADWLFEPKD VDDLADFLRD LDPAIPVMAL 
GLGSNLIVRD GGFPGVVVRL GKAFAKVEPI DATTLRCGGG ASGILVSSTA RDAGIAGMEF
LRSIPGTVGG FVRMNGGAYG GEVKDILVDC DVVLRSGERK TLALADLGYT YRHSELPEGA
VVVGATFRGR PGASAAIQAE MDRISASREA SQPLRSRTGG STFKNPAGHK AWQLVDAAGC
RGLMVGGAQV SEKHTNFLIN TGDATSADIE ALGEEVRRRV KDKSGIELQW EIQRVGKAE