| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1878 |
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| Symbol | ddl |
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| ID | 4082623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1975366 |
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| End bp | 1976292 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010254 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_616923 |
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| Protein GI | 103487362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.063714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGG GTCCGTGGCA TGTCGCCGTC CTGATGGGCG GCTGGTCGGC CGAGCGCGAG
GTGTCGTTGA TGAGCGGCAA GGGCGTGGCC GACGCGCTCG AAAGCCGTGG GCACAAGGTC
ACGCGTATCG ACATGGACCG CGACGTCGCG CTGCGGCTGG CCGAGGCGAA ACCCGATGTC
GTGTTCAACG CGCTCCACGG CGTTCCCGGC GAGGACGGCA CGGTGCAGGG GATGCTCGAC
CTGATGGGTT TCAGATATAC TCACAGCGGG CTCGTCACCT CGGTGATCGC GATCGACAAG
GAATTGACGA AGCAGGCGCT GGTGCCGCAT GGAATCCCCA TGCCGACGGG AACGATGGTC
GACAGCGAAA GCCTCTTTTC GGTCGACCCC TTGCCACGCC CCTATGTTCT GAAGCCCGTC
AATGAAGGCT CGTCGGTCGG GGTCGCGATC GTCAGGGACG ACAGCAATTA CGGCAATCCC
ATTTCGCGCG ATGCACTGGG CCCGTGGCAG CAGTTCGACC GCCTGCTTGC CGAACCGTTC
ATCAAGGGGC GCGAGCTCAC CGTCGCGGTG CTGGGCGACA CGGCGCTGGC TGTTACCGAA
CTGCGCGTCA AATCAGGCTT TTACGATTAT GACGCCAAAT ATACCGACGG GCTGACCGAG
CATGTCTGCC CCGCCGACGT GCCGGATGAC GTCGCGCAGC GGATGAAGGA TCTGGCGCTG
CAGGCGCACC GGCTGCTCGG CTGCAAGGGG GCGTCGCGCT CGGATTTTCG CTGGGACGAC
GAGCACGGCC TTGCGGGGAT TTTCCTGCTC GAGGTCAATA CCCAGCCCGG CATGACGCCG
CTCAGCCTCG TCCCCGAACA GGCGCGCGCG GTCGGGATGG ATTACGCCGA ACTGGTCGAA
CGCATCGTCG AGGAAGCACT GACATGA
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| Protein sequence | MSRGPWHVAV LMGGWSAERE VSLMSGKGVA DALESRGHKV TRIDMDRDVA LRLAEAKPDV
VFNALHGVPG EDGTVQGMLD LMGFRYTHSG LVTSVIAIDK ELTKQALVPH GIPMPTGTMV
DSESLFSVDP LPRPYVLKPV NEGSSVGVAI VRDDSNYGNP ISRDALGPWQ QFDRLLAEPF
IKGRELTVAV LGDTALAVTE LRVKSGFYDY DAKYTDGLTE HVCPADVPDD VAQRMKDLAL
QAHRLLGCKG ASRSDFRWDD EHGLAGIFLL EVNTQPGMTP LSLVPEQARA VGMDYAELVE
RIVEEALT
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