| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1871 |
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| Symbol | gcvT |
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| ID | 4080186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1966618 |
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| End bp | 1967742 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010247 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_616916 |
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| Protein GI | 103487355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.224663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.125667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAG ACGATGAGAT TCCGATCGAA ACGGCGACGC TGCCGCTCGA CGCCTGGCAC
CGCGCGAAGG GTGGCCGCAT GGTCGCGTTC GCGGGTTACT GGATGCCGAT CCAATATGAC
GGCATCATGG CCGAACATCT GTGGACGCGC GAGAATGCCG GGCTGTTCGA TGTCAGCCAT
ATGGGCCAGC TGGCGCTGAG CGGCGAGGGC GTCGCCAAGG CGCTCGAAAC GCTGGTCCCC
GGCGATATTT CGGCGCTGAA GCCCGGCCGG ATGCGCTATT CGCTGCTGCT GAACGACGAA
GGCGGTGTCC TCGATGACCT GATGATCACC AACGAGGGCG ACCAGTTCGG CATCGTCGTC
AATGGCGCGG TCAAATGGGA CGATATCGCC CATCTGCGCG AGCATCTGCC CGATGATATC
ACGCTCAACC ATAATGAGGA TTACGGCCTG CTGGCGTTGC AGGGGCCAAA GGCGGTGACG
GCGCTCGCGC GCCTTGTGCC CGAAGCAGCG GACCTCGTCT TTATGCAGGC GATGCCGGCG
ACATGGAACG GCCATGCGAT CGCGATCAGC CGCTCGGGCT ATACCGGTGA GGACGGGTTC
GAGATTTCGC TGCCGAACGA CGCGCTGGAG AGTTTCGCCG ACGCGCTTTG CGCGATGGAG
GAGGTGAAGC CCATCGGCCT CGGCGCGCGC GACTCGCTCC GCCTCGAAGC GGGATTGCCG
CTCTATGGCC ACGATCTCGA CGAAAGCATC GACCCGGTCG AGGCCGACCT GGCCTTTGCG
ATCAGCAAGC GCCGCCGCGA AGAGGGCGGC TTCCCCGGCG CGGCGCGCAT CCTTGGGCAT
CTGGCCGACG GCTCTCCACG CAAGCGCGTC GGCCTTGTCA TCGACGGCAA GCTGCCGGTG
CGCGAGGGCG CCAAATTGTT CGACGGCAAC ACCGAGATCG GCGTCGTGAC GTCGGGCGGC
TTTGCCCCCA GCGTCGGCGC GCCGATCGCC ATGGGTTACG TCCCGACGGG GCTGTCCGAG
CCGGGTACCG CGGTCGCCGC CGAGGTGCGC GGCAAGCGCG TCGCCTGCAC CGTCACCGCC
ATGCCATTCA TTCCGCACCG CTATGTGCGC AAACAGGGAG CCTGA
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| Protein sequence | MHEDDEIPIE TATLPLDAWH RAKGGRMVAF AGYWMPIQYD GIMAEHLWTR ENAGLFDVSH
MGQLALSGEG VAKALETLVP GDISALKPGR MRYSLLLNDE GGVLDDLMIT NEGDQFGIVV
NGAVKWDDIA HLREHLPDDI TLNHNEDYGL LALQGPKAVT ALARLVPEAA DLVFMQAMPA
TWNGHAIAIS RSGYTGEDGF EISLPNDALE SFADALCAME EVKPIGLGAR DSLRLEAGLP
LYGHDLDESI DPVEADLAFA ISKRRREEGG FPGAARILGH LADGSPRKRV GLVIDGKLPV
REGAKLFDGN TEIGVVTSGG FAPSVGAPIA MGYVPTGLSE PGTAVAAEVR GKRVACTVTA
MPFIPHRYVR KQGA
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