Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1850 |
Symbol | |
ID | 4082028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1945938 |
End bp | 1946420 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010225 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_616895 |
Protein GI | 103487334 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0408298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.531787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG CCATCCGCCC CGCCACCCGT GCCGACCTGC CGCTGATCGC CGAGTTCATC CGCGACCTCG CCGAATATGA AAGACTGTCG CACGAAGTCC GCTTCGACGA AGCGAAGCTC GGCGAAAACC TCTTCGGCCC GCGCCCCTAT GCCGAGGTCG TGATCGGCGA AATCGACGGG ACGCCGCAGG GCTTTGCGCT TTTCTTCCAC AATTTCTCGA CCTTCGAGGG GCGCCCCGGC ATCTACCTGG AGGATCTGTT CGTCCGTCCC GAAGCGCGCG GATCGGGACT CGGCAAGGCG CTGCTCGCGC ATCTCGCCGA ACTGTGCATC GAACGCGATT GCGCACGCCT CGAATGGTGG GTGCTCGACT GGAACGAACC CAGCATCGGC TTCTACAAGA GCCTCGGCGC CAGGATGATG GACGAATGGA CCGTGATGCG CGTCGATGGC GACGCGCTGA CCCGGCTTTC GCGCACCACG TGA
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Protein sequence | MTLAIRPATR ADLPLIAEFI RDLAEYERLS HEVRFDEAKL GENLFGPRPY AEVVIGEIDG TPQGFALFFH NFSTFEGRPG IYLEDLFVRP EARGSGLGKA LLAHLAELCI ERDCARLEWW VLDWNEPSIG FYKSLGARMM DEWTVMRVDG DALTRLSRTT
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