| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1848 |
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| Symbol | ispG |
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| ID | 4082026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1943525 |
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| End bp | 1944676 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010223 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_616893 |
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| Protein GI | 103487332 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.116834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.404651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC ATAATCCCGG CCTGCGCCCC TGGCGCGACA TTGCACGGCG GACGAGCCGC
CAGATCATGG TCGGAAACGT CCCCGTCGGC GGCGGCGCGC CGATCAGCGT GCAGACAATG
ACCAACACGC TGACGAGCGA TCCGGCGCAG ACGATCGACC AGATCCGCCG CTGCGAGGAC
GCCGGCGCCG ACCTGATCCG CGTCTCGTGC CCCGACACCG ATTCGACCGC GGCGCTCGGC
AAGATCGTCC GCGCGGCGCG CATTCCGATC ATCGCCGACA TCCATTTCCA CTATAAGCGC
GCATTGGAAG CCGCCGACGC CGGCGCCGCC TGCCTGCGCA TCAACCCCGG CAATATCGGC
TCGTCGGAAC GCGTCGGCGA GGTCGTGCGC GCCGCCAAGG CGAACGGCTG CGCGATCCGC
ATCGGCGTCA ACGCCGGCAG CCTCGAGAAG GACCTGCTCG AAAAATATGG CGAGCCCTGC
CCCGAGGCGC TCGTCGAAAG CGCGCTCGAC CATATCAAGC TGCTGCAGGA CCATGATTTC
CACGACTACA AGGTCGCGGT GAAGGCGAGC GACGTCTTCC TCGCGGTCGC CGCCTATGCG
CAGCTCGCCG ACGCGGTCGA CTGCCCGCTG CACCTCGGCA TCACCGAGGC GGGCGGGCTG
ATCGGTGGCA CGGTGAAAAG CGCGCTCGGC ATCGGCAACC TGCTCTGGGC CGGGATCGGC
GACACGATCC GCGTTTCGCT TTCGGCGGAA CCCGAAGAGG AAGTACGCGT CGGCTACGAG
ATACTGAAAT CGCTGGGCCT CAGAACCCGC GGCGTGCGCG TCGTCTCCTG CCCCAGCTGC
GCACGACAGG GTTTCGACGT CATCCGCACC GTCCAGGCGC TCGAGGACGC GCTCGGCCAC
ATCAAGACGC CGATGTCGCT CTCGGTCCTC GGCTGCGTCG TCAACGGCCC CGGCGAAGCG
CGCGAGACCG ACATCGGCAT CACCGGCGGC GGCAACGGCA GGCATATGGT CTATCTCTCG
GGCGTCACCG ACCACCATGT CGAGGACGCC GACATGATCG CGCACATCGT CAGGCTCGTC
GAAGCCAAGG CGGCCGAGAT CGAGGCGGGC AACGCGGTGA GCATGGACGT CGCGCACGGC
AAGGCGGCGT AG
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| Protein sequence | MSDHNPGLRP WRDIARRTSR QIMVGNVPVG GGAPISVQTM TNTLTSDPAQ TIDQIRRCED
AGADLIRVSC PDTDSTAALG KIVRAARIPI IADIHFHYKR ALEAADAGAA CLRINPGNIG
SSERVGEVVR AAKANGCAIR IGVNAGSLEK DLLEKYGEPC PEALVESALD HIKLLQDHDF
HDYKVAVKAS DVFLAVAAYA QLADAVDCPL HLGITEAGGL IGGTVKSALG IGNLLWAGIG
DTIRVSLSAE PEEEVRVGYE ILKSLGLRTR GVRVVSCPSC ARQGFDVIRT VQALEDALGH
IKTPMSLSVL GCVVNGPGEA RETDIGITGG GNGRHMVYLS GVTDHHVEDA DMIAHIVRLV
EAKAAEIEAG NAVSMDVAHG KAA
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