Gene Sala_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1841 
Symbol 
ID4082019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1934968 
End bp1935360 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID638010216 
Producthypothetical protein 
Protein accessionYP_616886 
Protein GI103487325 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.940249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.718832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT TCTCTCTCCC CCTCACCGCC ACCGCCGAGA GCATCGACGA GCTGGGGCAC 
GTCAACAATG CCGTCTGGGT CCAGTGGATT CAGCAGGTCG CGACAGGGCA TTGGGACGCC
GTCGCACCCG AAAGCCACAA GCAAGCCTAT ATCTGGGTCG TCGTGCGGCA CGAGATCGAC
TATCTGCGCG CGCTCGGCCC CGGCGAAACG GTGATCGCGC GGACGTGGGT CGCCGACAAG
CCGCAGGGCG CCAGGTTCGA CCGCTTCATG GAGTTTACCG GACAGGACGG GAAGGTTCAT
GTCCGTGCGC GGACGGTATG GGCGCTGCTC GACAAGGCGA GCGGCCGGCC GCTGCGCGTG
ACCGACGCGA TAGTGGCGCC GTTCGCCGAA TGA
 
Protein sequence
MKDFSLPLTA TAESIDELGH VNNAVWVQWI QQVATGHWDA VAPESHKQAY IWVVVRHEID 
YLRALGPGET VIARTWVADK PQGARFDRFM EFTGQDGKVH VRARTVWALL DKASGRPLRV
TDAIVAPFAE